Lates calcarifer (barramundi perch): 108877103
Help
Entry
108877103 CDS
T04895
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108877103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108877103
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108877103
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Macropinocytosis
Sorting nexins
108877103
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108877103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
LcrG
Motif
Other DBs
NCBI-GeneID:
108877103
NCBI-ProteinID:
XP_018522555
UniProt:
A0A4W6C0P9
LinkDB
All DBs
Position
LG16_LG22:4549055..4555673
Genome browser
AA seq
399 aa
AA seq
DB search
MTSTLDENNKEKMRSVSVDLNNDASLLIDIPDALCERDKVKFTVHTKTTLSSFQKPEFSV
PRQHEDFIWLHDTLVETEDYAGLIIPPAPPKPDFESPREKMHKLGEGEATMTKEEYTKMK
QELEAEYLAVFKKTVQVHEIFLQRLSSHPILSKDRNFQIFLEYDQDLSVRRKNAKEMFGG
FFKNMVKSADEVLISGVKEVDDFFEQEKTFLLDYYSKIKDSTAKAEKMTRSHKNIADDYI
HISATLNSISADDSTANKKHLEKLSDLFEKLRKVEGRVASDQELKLTELLRYYMRDIQAA
KDLLYRRARALADYENSNKALDKARLKSKDIPQAEEHQQQCLQKFDKLSESGKKELTGFK
GRRVVAFRKNLIEMAELEIKHAKNNVTLLQGCIDLLKSN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaccttagacgaaaacaacaaggaaaagatgcgctctgtgtctgtggatcta
aacaatgatgcctctcttctcattgacattcctgatgctctctgtgaaagggacaaagtc
aagtttactgtccatacaaagaccacactcagctctttccagaagcccgagttctctgtt
cccaggcagcatgaagacttcatctggctacatgacactctggttgagacagaggactat
gctggcctcataattcctccagcgcccccaaagcctgactttgagagcccaagagagaag
atgcacaaactgggggaaggtgaagctacaatgaccaaagaggagtacacgaaaatgaag
caggagctggaagctgaatacctggctgtgttcaagaagactgtccaagtgcacgaaatc
ttcctgcagagactgtcctctcaccccattttaagcaaagacagaaacttccagattttc
ttagagtatgaccaggatctgagtgtgagaagaaagaatgccaaggaaatgtttggagga
ttctttaaaaacatggtgaagtcagctgatgaggttcttatctcaggagtaaaggaagtt
gatgacttttttgagcaggagaagaccttcctgcttgactactacagcaagataaaagat
tccactgccaaggcagagaaaatgacccgctcacacaaaaatattgcggatgattatatt
cacatctctgccactctgaacagtatctctgctgatgatagtacagcaaataaaaagcac
ctggagaagttgtcagacctgtttgagaagctcagaaaagtggaaggaagagttgcatct
gatcaggagctgaaactgacagagctgctaagatattacatgagagacatccaggctgct
aaggaccttttgtacaggcgagcccgggcgttagctgactatgagaactctaacaaggct
ttggataaggctcgactgaaaagcaaggatattccccaggcagaggagcaccagcagcaa
tgcctgcaaaaatttgacaagctttcagagtctgggaagaaagagctcactggtttcaag
ggcagacgtgttgtggccttcaggaagaacctcatagagatggctgagcttgagataaaa
catgccaagaacaatgtgactctattgcagggatgcattgacctgctcaagagcaactga
DBGET
integrated database retrieval system