Lates calcarifer (barramundi perch): 108877124
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Entry
108877124 CDS
T04895
Name
(RefSeq) serine palmitoyltransferase 3 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00600
Sphingolipid metabolism
lcf01100
Metabolic pathways
Module
lcf_M00094
Ceramide biosynthesis
lcf_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108877124
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108877124
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
108877124
Amino acid related enzymes [BR:
lcf01007
]
Aminotransferase (transaminase)
Class II
108877124
BRITE hierarchy
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GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
UPF0154
Motif
Other DBs
NCBI-GeneID:
108877124
NCBI-ProteinID:
XP_018522586
UniProt:
A0A4W6BX29
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Position
LG16_LG22:4038143..4059416
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AA seq
549 aa
AA seq
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MSRTAANSNSKTHLNQNGLKSEDIKKNVYHNNREKNGPGTGVASGQHRQESFEQAPMYVA
VMTYLGFGIVTLFGYLRDFLRAVGLEKCHLAQEREEQKDFVPLYQDFENFYTRNLYMRVR
DNWNRPICSLPGPVFDLMERVSDDYNWTFRLTGRTIHNAINMGSYNYLGFAENKADFLKT
VADKTRQYGVGVCSTRQEIGNLNIHEELEKLVASFLGVESSMTFGMGFATNSMNIPALVG
KGCLILSDELNHTSLILGARLSGATIRVFKHNNMHSLDKMLKEAVCSGQPRTHRPWRKIL
IMVEGIYSMEGSVVQLPEIIALKKKYKAYLYLDEAHSIGAVGPTGRGVTELFGVNPADVD
VMMGTFTKSFGAAGGYIAGKKELVDYLRSHSHSAVYASAMSPPVTEQILRAMKCIMGKDG
STEGIRRIRQLAENTRYFRARLKEMGFIIYGNDDSPVVPILLYMPGKVVAFAREMLERKI
GVVVVGFPATPITEARARFCLSAAHTRTMLDQVLHHLNEVGDTLCLKFSRRKYSPQPDLC
DETDFELDS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaactgctgccaacagcaactcaaaaacacatttgaatcagaatggactgaaa
agcgaagatatcaagaaaaatgtctaccacaacaacagagagaaaaatggcccagggact
ggtgttgcctccgggcagcacaggcaggagtcctttgaacaggcgcccatgtacgtggct
gtcatgacatacctgggctttggcattgtcaccctgtttggctacctcagagatttcctc
agagctgtgggcttagagaagtgccaccttgcccaggagagagaggaacagaaggatttt
gtaccactttaccaagattttgagaacttctacactcgaaacctatacatgagagtacga
gacaactggaaccgtcccatatgcagcctgcctggaccagtctttgacctgatggagagg
gtgtctgatgactacaactggacattcaggttaaccgggaggacgatacacaatgccatc
aacatgggctcttacaactacctcggttttgctgagaacaaggctgatttcctgaaaact
gtggcagacaaaacgcgccagtatggggttggggtttgcagcacaagacaggaaataggt
aacctgaacatccatgaagagctggagaaactggtagccagtttccttggagtagagtcc
tccatgacatttgggatgggttttgccaccaattcaatgaacattccagcacttgttggc
aagggttgtttgattttgagtgatgagctcaaccacacatctctcatcttaggggccaga
ctgtcaggagcaaccatccgggtattcaaacacaacaacatgcacagtctggataagatg
ctaaaagaggcggtttgctcagggcagcctcggactcacaggccttggaggaagatcctc
atcatggtggaaggcatctatagcatggaaggctcagtggttcaactacctgagatcatc
gctctgaagaagaagtataaagcttatctgtacctggatgaagcccacagtattggagca
gtgggaccaacaggccggggagtgactgagctgtttggagtgaacccagctgatgtggac
gtgatgatgggaaccttcaccaagagctttggggctgccggaggctatattgcggggaaa
aaggagctggtggactacctgcgcagtcattctcacagcgcagtatacgcctcagccatg
tcccctcctgtcaccgagcagatcttacgcgccatgaagtgcattatgggaaaagacggg
agcacagagggcattagacggatccgccaattggcagagaacaccagatacttcagggcc
agactgaaggagatgggcttcatcatctacggcaatgatgactcacctgtggttccaatc
ctgctctacatgccaggcaaagtggtggcttttgctcgagaaatgctggagagaaaaatt
ggtgtggtggtagtcggcttcccagccacaccgattacagaggcccgagctcgcttctgt
ttgtctgcagcacacaccagaaccatgctggaccaggtgctgcaccatctgaacgaggtg
ggagacactctctgtctgaagttctcacggcgaaaatattcccctcagcctgacctctgt
gatgagacagactttgagctggacagctga
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