Lates calcarifer (barramundi perch): 108877132
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Entry
108877132 CDS
T04895
Name
(RefSeq) calpain-2 catalytic subunit isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
lcf04210
Apoptosis
lcf04217
Necroptosis
lcf04218
Cellular senescence
lcf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108877132
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108877132
04217 Necroptosis
108877132
04218 Cellular senescence
108877132
09144 Cellular community - eukaryotes
04510 Focal adhesion
108877132
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108877132
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
108877132
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C2: calpain family
108877132
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_8
EF-hand_6
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
108877132
NCBI-ProteinID:
XP_018522601
UniProt:
A0AAJ7LI43
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All DBs
Position
LG16_LG22:complement(4579505..4585940)
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AA seq
700 aa
AA seq
DB search
MSGIASKLQHNRERSHGIGSNSHAVKYLNQDYESLRRSCLEGGRLFEDDCFEALPSSLGY
NELGPNSYKIRGITWKRPTELCSNPKFIVENATRTDICQGALGDCWLLAAIASLTLNKQV
LSRVVPHDQSFEENYAGIFHFEFWQFGEWVDVVVDDRLPTRDGKLLFVHSAEGSEFWSAL
LEKAYAKLNGCYEALSGGSTTEGFEDFTGGIAERHDLSRADPHLFKIIKKALDRGSLLGC
SIDITSAADSEAVTYRKLVKGHAYSVTGAEQVEYRGDTVQLIRIRNPWGQVEWNGAWSDT
SSEWRYVSDDDRRRLTNRAEDGEFWMSFSDFLRQYSRLEICNLTPDALTGDEYKKWAESE
FEDTWRKGVSAGGCRNYPNSFWMNPQFVIKLDEVDDDPDDGEEGCTFIVGLMQKNKRRMR
KKGEDMETIGFAIYELPEEYSGKRQVHLKKNFFLYNCSAARSETFINLREVCNRFCLPPG
EYLIIPSTFEPNKNGDFYMRVFSEKQADFQEIDDPVDCHVEEVDIDEDDICDRFKRLFEK
LAGHDVEISAFELQRILNRVLVKRDDIKTTGFSLSTCHNMVNLLDKDGSGKLGLVEFKIL
WAKIEKFLDLYKERDTDQSGCMNSSEMRMAVEAAGFSLNNPLHQIIVARYSEPCLTIDFD
NFVCCLIRLGMLFKTFKTMDKDGSGVIELGFMEWLDLAMV
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcattgcaagtaagcttcagcacaaccgagagcgatcacatggaattggatcc
aactctcacgcggtgaagtacctgaaccaggactacgagtcgctgaggagaagctgtctg
gagggaggacggctgtttgaggatgactgctttgaggctctgccctcatccttaggctac
aacgagctgggaccaaattcctacaaaattcggggcatcacctggaagagacccacggag
ttatgttccaatccaaaattcattgttgaaaatgctaccaggactgatatttgccaagga
gcacttggtgactgctggctcctggcagctatcgcctccttgaccctcaacaaacaggtt
ttgtctcgggttgtcccccatgaccaaagctttgaggagaactatgctggcatctttcac
tttgagttctggcagtttggtgagtgggtggatgtggtggtcgatgaccgtctgcccacc
agagatgggaagctgctgtttgttcactcagcagagggctcagagttttggagtgcgctg
ctggagaaggcttatgctaagctgaatggatgttacgaggctctctctggaggcagcacc
actgagggttttgaggatttcactggaggcatcgctgagaggcacgacctcagcagggca
gatccccatctcttcaaaatcattaagaaggccctggacagaggctcccttctgggatgc
tccattgatatcaccagtgcagctgactcagaagctgtcacatatcgcaagctggtgaag
ggtcatgcctattcggtgacaggagcagagcaggtggagtacagaggagacacggtgcag
ctgatcaggattagaaacccatggggtcaggtggagtggaatggagcctggagtgacacg
tcttctgaatggagatatgtgagtgatgatgataggaggaggctgaccaaccgtgctgag
gacggagagttctggatgtcattttctgacttccttcgccaatattctcgccttgagatc
tgcaacctcacccctgacgctctcacaggcgacgagtacaagaaatgggcagaatcagag
tttgaagacacatggagaaagggcgtgtctgctggtggctgcagaaactatccaaattcc
ttctggatgaatcctcagtttgtcataaagctggatgaggtggatgatgaccctgatgat
ggtgaggagggctgcaccttcattgtgggcttgatgcagaagaacaagcgccgtatgagg
aaaaagggggaggacatggagaccatcggctttgccatctatgagctgcctgaggagtac
tctggcaaaaggcaagtgcacctgaagaaaaacttcttcctgtacaactgttcagcagca
cgctccgagaccttcatcaacttgcgggaagtgtgcaaccgcttctgtcttcctcctgga
gaatacctcatcatcccctccacctttgagcccaacaagaatggagacttttatatgcgg
gtgttctctgagaaacaggctgatttccaagagattgatgatcctgtggactgccatgtt
gaggaggttgatattgatgaagatgatatctgtgacagattcaagagactcttcgaaaag
cttgcaggacatgatgtggaaatttctgcatttgagctgcagagaatcctcaacagagtg
ctggtcaagagagatgacatcaaaaccactgggtttagcctgtcgacctgccacaacatg
gtcaatctgctggataaagacggaagtggcaagctgggactggtagaatttaagatcctg
tgggcaaagattgagaaattccttgatctgtacaaagagagagacacagaccaaagtggc
tgcatgaactcctctgagatgcgaatggctgttgaggctgctggtttctctctcaacaat
cctctgcatcagataattgtggcccgctacagtgaaccatgcctcaccattgactttgac
aactttgtgtgctgtctgatccgcttggggatgctcttcaaaaccttcaagaccatggac
aaagatgggtctggtgtgatagagctaggttttatggagtggctggatctggccatggtg
tag
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