Lates calcarifer (barramundi perch): 108877140
Help
Entry
108877140 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: epsilon-sarcoglycan
KO
K27061
epsilon-sarcoglycan
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108877140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Motif
Other DBs
NCBI-GeneID:
108877140
NCBI-ProteinID:
XP_018522613
UniProt:
A0AAJ7LH83
LinkDB
All DBs
Position
LG3:9003238..9014604
Genome browser
AA seq
442 aa
AA seq
DB search
MMGTMSAAAVAVWLGTVVTILSRSHADRNVYPSAGVLFVHVLEREYFKGEFPPYPKSGDA
SNDPITFNTNLMGYPDRPGWLRYIQRTPHSDGVLYGSPTAEHVGKPTVIEITAYNRRTFE
TARHNLVINIMATEEFPLPYQAEFYIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAIN
ITSALDRGGRVPLPINNLKEGVYVMVGADVPFSSCLREVESPHNQLRCSQEMEPVISCDK
KFRAQFHIDWCKISLVDINKVVPVYITRPDPGTGILPEFGDYNPPSESLKSRDYFSDFLI
TLAVPSAVALVLFFILGYTMCCRREGVEKRNMQTPDIQLVHHSSIQKSTKELRSMSKNRE
ISWPLSTLPVFNPVSGEVVPPIHPDNYETTSMPLMQTQTNLQNQITIPQQRPSGDNYVMS
TFRRLEVNGIPEERKVAEALNL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcaccatgtccgctgcagctgtcgcggtgtggctcggcacggtggtcaccatc
ttgtcgaggtctcatgcagaccgtaacgtctacccatctgcgggagtgctgtttgtccat
gttctggagagagagtacttcaaaggagagtttcctccctacccaaaatcaggtgatgca
agcaacgacccgatcactttcaacaccaacctgatgggctaccccgacaggccaggctgg
ctgcgttacatccagaggacgccgcacagcgacggagtgctctatggttcccccaccgca
gaacacgttggcaagcccaccgtcatagagattactgcctataacagacgcacttttgag
acagcacggcacaacttggtcataaacatcatggccacagaagagttccctttgccctac
caggcggagttttacatcaaaaacatgaacgtggaggagatgctggccagcgaggtgctg
ggggacttcctcggagcggtgaagaacgtctggcagcctgagcgcctcaacgccatcaac
atcacctcagcactggaccgtggtggccgtgtgcccctgcccatcaataacctcaaagaa
ggagtgtatgtgatggttggcgctgatgttcccttctcatcgtgcctgcgggaggtggaa
agcccacataaccagctgcgctgcagtcaggagatggagcctgtcatcagctgtgacaag
aagttcagagctcagtttcacatcgactggtgtaaaatttccctggttgacatcaacaaa
gtagtcccagtgtacattacccgtcctgacccaggcacagggatcctccctgaatttggg
gactacaacccgccctctgagtctctgaagagccgggactacttctctgacttcctcatc
acgctggctgttccctccgccgtggcactagtcctcttcttcatcctcggctacactatg
tgctgccgacgggaaggggtggaaaaaagaaacatgcaaacaccagacatccagctggtt
caccacagctccatccagaagtccaccaaggagctgcggagcatgtctaagaaccgcgag
atctcctggccactctccaccttgcccgtcttcaacccggtcagtggcgaggtggtgcca
cccatccacccggacaactacgagaccaccagcatgcccctcatgcagacacagacgaac
ctgcaaaatcagattacaataccacagcaacggccatcaggagataattatgtcatgtca
acgtttcgaaggctggaggtaaatggtattcctgaagagcgaaaggtggccgaagccctt
aatttgtga
DBGET
integrated database retrieval system
