Lates calcarifer (barramundi perch): 108877189
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Entry
108877189 CDS
T04895
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108877189
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108877189
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
WHD_NOD2
PRY
LRR_6
SPRY
LRR_4
DUF4329
DFF-C
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108877189
NCBI-ProteinID:
XP_050921720
UniProt:
A0AAJ8AVZ9
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All DBs
Position
LG7_2:complement(382898..429277)
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AA seq
1131 aa
AA seq
DB search
MSQCEEPEPEPEPGPEPGPGQQDTGQQPSTTKRKLEEPEPSCVSMKSDYSVERYINFKGQ
QPSAANRRKLEEPEPSCLSMKSDYSVERYINFKGQSPAAERVDQESSEVPSGQSAQQHQT
HLDSIFMLLEENIVTFVKKELKKMQKVLSPDYPECLESQREDEEVLDGEDEEQRRSSREE
FLKITLNFLRRMKQEELADCLQSKSPAMCQHNLKSNLKKKFQCLFEGISKAGNPTLLNQI
YTELYITEGGTGEVSDEHEVRQMETTSRKPDRPETTIRQEDIFKASPGRDEPIRTVMTKG
VAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKLSLVELVHHFFTETKE
AGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARL
WITTRPAAANQIPPECVDMVTEVRGFTDPQREEYFRKRFRDEDQASRIISHIKTSRSLHI
MCHIPVFCWITATVLEDVLKTREGGELPKTLTQMYIYFLVVHTKLKNIKYDGGSGTDPHW
SPETKKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQ
DKVFCFVHLSVQEFLAALHVHLTFIKSGVNLLSEEQPTSQKSKRRKDDSAETQFYQSAVD
KALQSPNGHLDLFLRFLLGLSLQTNQILLRGLLTQTGSGSETNQETVQYIKKKVEETPSA
EKSINLFHCLNELNDRSLVELIQQSLSSGRLSTDKLSPAQWSALVFILLSSEKDLDVFDL
KKYSASEEALLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSQSSSLTDLDLSNNDLK
DSGLKTLSVGLESPHCSLETLSLSGCLITEEGCASLVSALRSNPSHLRELDLSYNHPGDS
GVKLLSAGLEDPDWRLDTLRVEPGGVRWLRPGLRKYSCQLTFDTNTVNTKIKLSDDNRKM
IRVEEDQSYPDHPDRFDHWLQLLCRTGLTGRCYWEVEWSGRVDVSLSYRGIRRKGKSGDC
WFGRNNQSWSLRSADDGYSVCHNNIRTYISSSSSSSSSSSSSSSSSSSSSSSSVSNRVAV
YVDCPAGSLSFYRVSSDSLIHLHTFNTTFTEPLYPGFGFWRSGSSLSLCSV
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtgtgaggaacctgaacctgaacctgaacctggacctgaacctggacctgga
caacaggacacaggacaacaaccctcaactacaaagaggaagctggaagaacctgaaccc
agctgtgtgtccatgaagagtgactattcagttgaacgctacattaattttaaaggacaa
caaccctctgctgcaaacaggaggaagctggaagaacctgaacccagctgtttgtccatg
aagagtgactattcagttgaacgctacattaattttaaaggacaatcccctgctgcagag
agagtggaccaggagagctcagaggttcccagtggtcagtctgcccagcagcatcaaaca
cacctggactccatatttatgctgctggaggagaacatcgtcacttttgtgaagaaggag
ctgaagaagatgcagaaggttctgagtccagattacccagaatgcttagagagtcagagg
gaggatgaggaggtgttggacggtgaggatgaagagcagaggaggagcagcagagaggag
tttctgaagatcacactgaacttcctgaggagaatgaagcaggaggagctggctgactgt
ctgcagagcaaatctcctgctatgtgccagcacaacctcaaatctaacctgaagaagaag
ttccagtgtttgtttgaggggatctctaaagcaggaaacccaacccttctgaatcagatc
tacacagagctctacatcacagagggagggactggagaggtcagtgatgaacatgaggtc
agacagatggaaacaacatccaggaaaccagacagaccagaaacaaccatcagacaagaa
gacatctttaaagcctcacctggaagagatgaaccaatcagaacagtgatgacaaaggga
gtggctggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaagac
aaagccaaccaggacatacacttcacatttccattcactttcagagagctgaatgtgctg
aaagagaaaaagttgagcttggtggaacttgttcatcacttctttactgaaaccaaagaa
gcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgag
tgtcgacttcctctggacttccacaacactgagatcctgactgatgttacagagtccacc
tcagtggacgtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctc
tggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtg
acagaggtcagagggttcactgacccacaaagggaggagtacttcaggaagaggttcaga
gatgaggatcaggccagcaggatcatctcccacatcaagacctcacgaagcctccacatc
atgtgccacatcccagtcttctgctggatcactgctacagttctggaggatgtgttgaaa
accagagagggaggagagctgcccaagaccctgactcagatgtacatctacttcctggtg
gttcacaccaaactgaagaacatcaagtatgatggaggatctgggacagatccacactgg
agtccagagaccaagaagatgattgagtctctgggaaaactggcttttgatcagctgcag
aaaggaaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagca
gcctcagtgtactcaggagtgttcacacagatctttaaagaggagagaggactgtaccag
gacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgtc
catctgaccttcatcaagtctggagtcaatctgctgtcagaagaacaaccaacctcccag
aagtctaaaagaagaaaagatgactctgcagagacacagttttaccagagtgctgtggac
aaggccttacagagtccaaatggacacctggacctgttcctccgcttcctcctgggtctt
tcactgcagaccaatcagattctcctacgaggtctgctgactcagacaggaagtggctca
gagaccaatcaggaaacagtccagtacatcaagaagaaggttgaagagactccctctgca
gagaaaagcatcaacctgttccactgtctgaatgaactgaatgatcgttctctagtggag
ttgatccaacagtccctgagttcaggacgtctctccacagataaactgtctcctgctcaa
tggtcagctctggtcttcatcttactgtcatcagaaaaagatctggacgtgtttgacctg
aagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctct
aacaaagctctactgagtggctgtaacctctcagagagaagctgtgaagctctgtcctca
gttctcagctcccagtcctctagtctgacagatctggacctgagtaacaacgacctgaag
gattcaggactgaagactctgtctgttggactggagagtccacactgttcactggagact
ctcagtctgtcaggctgtctgatcacagaggaaggctgtgcttctctggtctcagctctg
agatccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactca
ggagtgaagctgctgtctgctggactggaggatccagactggagactggacactctcagg
gtggagcctggtggagtccgatggttgagaccaggtctgaggaagtattcctgtcaactc
acatttgacacaaacacagtgaacacaaagatcaaactgtctgacgacaacaggaagatg
atacgtgtggaggaggatcagtcatatcctgatcatccagacagatttgatcactggctt
caactgctgtgtagaactggtctgactggtcgctgttactgggaggtcgagtggagtgga
agggttgatgtatcattgagttacagaggaatcagaaggaaaggaaagagtggcgattgc
tggtttggaagaaacaatcagtcctggagtctgagatctgctgatgatggttactcagtc
tgtcacaataacataaggacatatatctcctcctcctcctcctcctcctcctcctcctct
tcctcctcctcctcctcctcttcctcctcctcctcctctgtctctaacagagtagcagtg
tatgtggactgtcctgctggctctctgtccttctacagagtctcctctgactctctgatc
cacctccacaccttcaacaccacattcactgaacctctgtatcctgggtttggtttctgg
cggtctggttcctcattgtctctgtgttcagtgtag
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