Lates calcarifer (barramundi perch): 108877269
Help
Entry
108877269 CDS
T04895
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108877269 (siah2l)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108877269 (siah2l)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108877269 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108877269
NCBI-ProteinID:
XP_018522757
UniProt:
A0A4W6C6K5
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MLPPARQLTGKGPQLEAMSRPSSAGAGGGGLGAGKAGGGKHGGSGGAAAAAAAAAAAAAA
AAAAGVSSVAGSGSAAPSSAVSLPSPGLPGTPSELTALFECPVCFDYVLPPILQCQAGHL
VCNQCRQKLSCCPTCRGPLTPSIRNLAMEKVASTLPFPCKYSSAGCLLSLHHSEKPDHEE
VCEFRPYTCPCPGATCKWHGSLEAVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWV
MMQSCFSHHFMLVLEKQEKYEGHQQFFAVVLLIGTRKQAENFAYRLELNGNRRRLTWEAT
PRSIHDGVAAAIMNSDCLVFDTSIAHLFADNGNLGINVTISMC
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgcccgctcggcagctcacagggaagggaccgcagctggaagccatgagccgt
ccgtcctcagccggagccggaggtggaggactcggggcggggaaagcgggcgggggaaag
cacgggggttcgggaggcgccgctgccgccgccgccgcagctgcagcggccgcagcagcg
gcagccgccgccggcgtgagctccgtggccgggtcggggtccgctgccccttcctccgcg
gtgtccctgccctcgcccggcctgcccgggacgccctcagagctcacggcgctgttcgag
tgcccggtgtgcttcgactacgtcctgccgcccatcctgcagtgtcaggcgggtcacctg
gtctgcaaccagtgccgccagaagctgagctgctgcccgacctgccgaggcccgctcacc
ccgagcatccggaacctggccatggagaaggtggcctccacgctgccgttcccctgcaag
tattcgtcagccggctgtctgctgtcccttcaccacagcgagaagcctgatcacgaggag
gtgtgcgagttcaggccgtacacctgcccgtgtcccggggccacctgcaagtggcacggc
tcgctggaggccgtcatgccgcacctgatgcacgcgcacaagtccatcaccacgctgcag
ggggaggatatcgtcttcctggcgacggatatcaaccttcccggcgctgtggactgggtg
atgatgcagtcgtgtttcagccaccacttcatgctggtcttggagaagcaggagaagtat
gagggccaccagcagttcttcgccgtcgtgctgctcatcggcacccgcaaacaggccgag
aacttcgcctaccgcctggagctcaacggtaaccgccgtcggctcacttgggaggccacg
ccgcgctccatccacgacggcgtggcggccgccatcatgaacagcgactgcctggtgttc
gacacctccatcgctcacctgttcgccgacaatggcaacctggggatcaacgtcaccatc
tccatgtgctga
DBGET
integrated database retrieval system
