Lates calcarifer (barramundi perch): 108877282
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Entry
108877282 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein unc-13 homolog A
KO
K15293
protein unc-13 A/B/C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108877282
Membrane trafficking [BR:
lcf04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
108877282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
Motif
Other DBs
NCBI-GeneID:
108877282
NCBI-ProteinID:
XP_050933243
UniProt:
A0AAJ8BHP3
LinkDB
All DBs
Position
LG17:9504438..9551944
Genome browser
AA seq
1816 aa
AA seq
DB search
MSLLCVGVKKAKLDGPQEKFNTYVTLKVQNVKSTTIAVRGSQPCWEQDFMFEINRLDLGL
TVEVWNKGLIWDTMVGTLWIPLRSIRQSNEEGPGQWLTLDSNVIMAENEICGTKDPTFHR
LLLDTRFELPLDIPEEEARYWAKKLEQLNAMRDQDYAYQEEQERPLHAPSTQCCNWSLWG
DQQNEDPDSAVDDRDSDYRSETSNSIPPPYYTTSQPNASMHQYPMRHQHYRHSYNDDIHE
LDYDHRAMRRYDSLDSATNGRSDIDSGSGSSRRTSRQYSLDSRHSLSDSPTDSRYASSGE
LSRGSSQLSEEFVPEDGESLRGSEFYDENDSYHSCHSSVSYGKEDSPGWDGEDHQGVYSD
EGGYLKDGGEEGALYDEDEGDMYGEEGEYNYEDEEEMPYEEDEDMYPLDGTLSEDQEPPY
TPTPTSTAPTLMPPSDGLSSTRPPLEKQASLHQQRPAHDQLQPPGTAPGLPPVSQEDTLP
PSGSDSTKPPFAPSQPDMSTTTSSIPSTTSQVPAADSKPLEPEPKSETPFVERQPSEQPP
AAESIPPAPVEKPEEPPVPSFPKREIMEPGPARAKANWLRLFSRVRLQLQEARGESVGIA
SLLLSAGMGGALYSIDSMPDLRKRKAMPLVRDLSLVQNSRKAGITSALTSSTLHNEELKS
HVYKKTLQALIYPISCTTPHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEK
CQDLLNADCLQRAAEKSSKHGAEDRTQNIIMVLKDRMKIRERNKPEIFELIQEVFTVPKS
THVTHMKQIKQSVLDGTSKWSAKISITVLCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKT
IYGNLNPVWEETFNFECHNSSDRIKVRVWDEDDDIKSRVKQKFKRESDDFLGQTIIEVRT
LSGEMDVWYNLDKRTDKSAVSGAIRMHINVEIKGEETVAPYHVQYTCLHENLFHYVTDIQ
NNGVVKIPDAKGDDAWKVYFEETPQEIVDEFAMRYGVESIYQAMTHFACLSSKYMCPGVP
AVMSTLLANINAYYAHTTQATNNVSASDRFAASNFGKERFVKLLDQLHNSLRIDLSMYRN
NFPASSPERLQDLKSTVDLLTSITFFRMKVQELQSPPRASQVVKDCVKACLNSTYEYIFN
NCHELYSREYQTDPAKQGAVPPEEQGPSIKNLDFWSKLITLIVSIIEEDKNSYTPCLNQF
PQELNVGKISAEVMWNLFAQDMKYAMEEHEKNRLCKSADYMNLHFKVKWLYNEYCKDLPF
FKSRVPEYPAWFEPFVIQWLDENEEVSRDFLHGALERDKKDGFQVTSEHALFSCSVVDVF
SQLNQSFEIIRKLECPDPQIVGHYMKRFAKTISNVLLSYADIISKLFANYVTMEKVPCIL
INNIQQLRVQLEKMFEAMGGKDLCVEASDILKDLQVKLNNVMDDLSRVFSVSFQPHIEEN
VKQMGDILAQVKGTSNVGNASSVAQDADNVLQPIMEFLDSNLTLFAKICEKTVLKRVLKE
LWKLVMNTMEKTIVLPPLTDQTGTQLIFNAAKELGQLSKLKEHMVREEAKALTPKQCAVI
ELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLHYALSLYTQATDKLIKTFVQSQNAQVFG
GKGVRFTTSEDVYPDKGSGVDDAVGEVSIHVEIFTHPNTGEHKVTVKVVAANDLRWQTQG
IFRPFVEVYIIGPHLSDKKRKYATKSKNNSWAPKYNETFTFTLSNEVGPECYELQVCVKD
YCFAREDRTVGMAVLQLKDMASKGSVACWLPLGKRIHMDETGLTVLRILSQRNNDDVAKE
FVKLKSDQRSAEEGRS
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgctgtgtgttggagtgaagaaagccaagctcgatggaccccaagagaaattt
aacacatacgtgaccctgaaggtgcagaatgttaagagcacaaccatcgctgtgcgcggc
agtcagccgtgctgggagcaggatttcatgtttgaaataaaccgcctggatctgggcctg
acagtggaggtgtggaataaagggctgatctgggacaccatggtgggcaccttatggatc
cccctgcgcagcatacggcagtccaatgaggagggtccgggtcagtggctgaccctggac
tctaacgtgatcatggctgagaatgagatctgtggaaccaaagacccgacctttcacagg
ctgctgctcgacacccgctttgaactgccactagacattccagaggaagaggccagatac
tgggccaagaaacttgaacaacttaatgccatgagagatcaagattatgcctatcaagag
gaacaggaacgaccactacatgcaccatccacacagtgctgtaattggagtctgtgggga
gatcagcaaaacgaggacccggacagcgctgtggacgacagggacagcgactaccgcagt
gagaccagtaacagcatcccgcctccctactacaccacctctcagcccaacgcctccatg
caccagtatcccatgagacaccagcactacagacactcctacaacgacgacatccatgag
ctggactatgaccacagagccatgagacgctatgatagtttagactcggccaccaacggg
cgcagcgatatcgactcaggctcagggtcgagccggcgcaccagtcgtcagtattctcta
gacagtaggcattcactgtccgatagtcccacagacagtcgttacgcctcatcaggcgag
ttgagtcggggcagctctcagctcagtgaggagtttgtaccagaggacggcgagagcttg
cgaggttcagagttctacgatgaaaatgactcctaccactcctgccactcttcagtcagc
tacggcaaagaggattccccaggctgggatggcgaagaccaccaaggcgtctacagcgac
gagggaggctacctcaaagacggaggggaagagggggcgctgtatgacgaagacgaggga
gacatgtatggggaggaaggagagtacaactatgaggacgaggaggagatgccatacgaa
gaagatgaagatatgtatccgcttgacggcacactcagtgaagaccaggaaccgccctac
acccccacacccacaagcactgccccgaccctgatgccgccctctgatggtctgtcctcc
accaggccaccactggagaagcaggcatcattgcatcagcagcggccggcccacgatcag
ctccagcccccaggcacagctcccggtcttcctccagtgtcacaggaagacacgctaccc
ccttcaggttcagactccaccaaacctccctttgcaccctcacagccagacatgtctacc
actacgtcatccatcccttcaacaacatcacaagtcccagctgcagactccaagcccctg
gagcctgagcccaaatctgagacaccgtttgtggagcgtcaaccctccgagcagcctcca
gcagcagagagcatccccccagctcctgtagagaaaccagaggagcctcctgttccaagc
ttcccaaagagagaaatcatggagcctggtcctgccagagccaaagccaactggcttaga
cttttcagcagagtgcgactacagctgcaagaggccagaggagaaagtgttggcatcgcc
tctctgcttttatcagcagggatgggtggcgctctgtatagcattgacagtatgccagac
ctcaggaagaggaaagctatgcctctggtcagagatctgtctttggttcagaactccagg
aaagcaggcatcacctcagccctgacgtccagcaccctgcataatgaagaactgaagagt
catgtctataagaagacccttcaggccctcatatatcccatctcctgcaccaccccgcac
aattttgaggtgtggacagccactacccccacttactgctatgagtgtgagggactgctg
tggggcattgctcgccagggcatgcgctgtaccgagtgtggagtcaaatgtcatgaaaag
tgccaagatctactcaatgctgactgtctgcaaagggcggcagagaagagctccaaacat
ggtgcagaggaccgaacccaaaacatcatcatggttctcaaggaccgcatgaagatccgc
gagaggaacaaaccagagatctttgagctcattcaggaagtgttcaccgtccccaagtcc
acccacgtcacccacatgaagcagatcaaacagagtgtgctcgatggcacctctaaatgg
tcggccaagatcagcatcacagtgttgtgtgcccagggtctacaagccaaggataaaact
ggttccagtgacccttatgtcaccgtccaggtgggaaagaccaaaaaaaggaccaagacc
atttatggcaacctcaaccctgtctgggaggagacatttaattttgagtgtcacaactcc
tcagatcgtatcaaggtgcgagtgtgggatgaggacgatgacattaagtctcgagtgaag
cagaagttcaagcgggagtcagatgacttcctcggtcagactatcatcgaggtccgcact
ctgagcggagagatggacgtctggtacaatctcgacaagcgtacagacaaatcagctgtg
tctggagctatccgcatgcacattaatgtagaaatcaaaggagaggagacagtcgccccg
tatcacgttcagtacacctgtttgcatgaaaacctcttccattatgtgacggacatccag
aacaatggtgtggtaaagatccctgatgctaaaggggatgatgcatggaaggtttacttt
gaggagacgccccaggagattgtagatgagtttgccatgcgttacggagtggagtccatc
taccaggcgatgacccacttcgcctgcctgtcatctaagtacatgtgcccaggtgtgcct
gcagtgatgagtaccctgctggctaacatcaatgcctactacgcccacaccacccaggca
accaacaatgtctctgcctccgaccgctttgccgcttctaactttgggaaagagcgattt
gtcaagcttctagatcagctgcacaactctctgaggatcgacctgtccatgtaccgaaac
aacttcccagccagcagtcctgaaaggctgcaggacctcaagtccacagtggacctcctc
accagtatcactttcttcagaatgaaggtccaggaacttcagtctccacccagagccagt
caggtagtgaaggactgtgtcaaagcctgtctcaactccacctacgagtacatctttaat
aactgtcatgagctctacagccgcgagtatcagacagacccggccaaacagggtgctgtg
cctccagaggagcaaggaccaagcatcaagaatctggacttctggtccaaactcatcacc
cttattgtctccattatcgaggaggacaagaactcctacactccctgcctaaaccagttt
ccccaggagctcaacgtgggtaaaatcagtgctgaagtgatgtggaacctgtttgctcag
gatatgaaatatgcaatggaggagcatgaaaaaaatcgcttgtgtaagagtgcagattac
atgaacctgcatttcaaggtcaagtggctatacaacgagtactgcaaagacctgcccttc
tttaagagcagagtgcctgaatatcctgcgtggtttgagccgtttgtcatccagtggctg
gacgaaaatgaggaagtgtctcgggactttctgcacggtgctttggaaagagacaaaaaa
gatgggttccaggtcacatcagaacatgctctgttctcctgttcggtggtggacgtgttc
tcccagctcaaccagagctttgagatcattaggaagcttgagtgtccagatccacagatt
gtaggacactacatgaagcgatttgctaagaccattagcaatgtacttctgtcctatgct
gacatcatctccaagttgtttgccaactatgtcaccatggagaaagtgccctgcatcctg
atcaacaacatccagcagctgagagttcagctggagaagatgtttgaagcgatgggtgga
aaagatttgtgtgtggaagccagcgacatcctaaaagacctgcaggttaagctcaacaat
gtcatggatgatctcagcagggtcttttctgtcagtttccagcctcatattgaggagaat
gtgaagcagatgggagacatcttggctcaggtgaagggaacttcaaatgtagggaatgcc
agcagcgtggcccaggatgctgacaatgtcttgcagcccatcatggagttcctggacagc
aacctgactttgtttgcaaagatctgtgagaagactgtgctgaaacgtgtgttgaaggag
ctgtggaagctggtgatgaacaccatggagaagaccattgtgctgccaccgctcacagac
caaacgggcactcagctcatctttaatgccgccaaggagctgggacagctgtccaagctg
aaggagcacatggttcgtgaggaggccaaagcgctcacacctaagcagtgcgctgtgata
gagctggctctcgacaccatcaagcaatacttccatgctggtggtgtgggtctgaagaag
actttcctggagaaaagtcctgacctccagtctctccactacgccctgtccctctacaca
caggccacagataaactcattaagacttttgtccagtcacagaacgcacaagtgttcggc
gggaagggggtgaggttcaccactagtgaggatgtttacccagacaagggctctggggtg
gacgatgccgtaggagaagtgtccatccatgtggagattttcactcaccccaacactgga
gagcacaaggtcacagtgaaagtggtggctgccaatgacctgaggtggcagacgcaggga
atattccggccatttgtggaggtctatatcatcggccctcacctcagcgacaagaaaagg
aagtatgccaccaagtcgaagaacaatagctgggctcccaaatacaatgaaaccttcact
ttcaccctgagcaacgaggtgggtcctgagtgctacgagctgcaggtgtgtgtgaaggac
tactgcttcgcccgagaggaccgcaccgtgggcatggccgtcctgcagctgaaagacatg
gcctccaaaggcagcgtcgcctgctggctgccgctgggtaaacgcatccacatggacgag
acgggcctcaccgtcctgcgcatcctctcccagcgcaacaacgacgacgtggccaaggag
tttgtcaagctcaagtccgaccaacgttccgccgaggagggccgcagctaa
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