Lates calcarifer (barramundi perch): 108877289
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Entry
108877289 CDS
T04895
Symbol
hcn2b
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108877289 (hcn2b)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
108877289 (hcn2b)
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
108877289
NCBI-ProteinID:
XP_018522793
UniProt:
A0A4W6C6K8
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All DBs
Position
LG17:9000900..9047420
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AA seq
1065 aa
AA seq
DB search
MDEAEDGEEEPKFQQPRPPQVPSLTGCEDHGSSGGTKMKKFTPGGGAASIARKNSNNNEL
WLLQDEDSAPLSASGSTAPTLSRQRDAAGGRDGSESDHRSGGDTVSEAGVIGEGAIGMIC
NKNGDCRRDPTSSGSLSSLISRQEKQADGVVAAAEDGKGQAASMDGSVTSPGSLTQGPGA
EVKTAAAAMEKKDSRVSFSNAPTSKGQTPSQQSRNSVTFSKAEDGSQIVPDDGDARGNQT
YMQRQFSSMLQPGVNKFSLRMFGSQKAVEKEQERVKSAGNWIIHPYSDFRFYWDFTMLMF
MVGNLIIIPVGITFFKDETTTPWIIFNVVSDTFFLMDLVLNFRTGIVFEDNTEIILDPKK
IKKKYLKSWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLS
RLIRYIHQWEEIFHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVS
LNKMVNDSWSELYSFALFKAMSHMLCIGYGRQAPESMSDIWLTMLSMIVGATCYAMFIGH
ATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILEE
LNEPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLRFEVFQPGDYIIREGTIGKKM
YFIQHGVVSVLTKGSIGMKLMDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEV
LEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNRENEMIQEIVKYDREM
VQQVNVPRPRAMSMTSPLHGGIFTPPGSSTQPQNSAIATLQQAVAMNFCPPMQGNSMGAG
NLQSPRMVRRFQVMQSVSSPVPASPLQSQLLASGAFAPVLSSPPVQSPLAVGGRSFQYGS
SALAGPTSGSQLSLTQQHTASPAHRLSTHKSTHSLQMGSLSQDARALSASQPSLPHEVAQ
PGAPSPPQSTRVSSTSIGPPQAASSHTGVRSAIPHRVVLPHQMSVGAFPVASLPGSGQSF
GAAAGLAVGGVGASLGESGLPKKDSIVSLPETDHIKVRSRLSSNL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcggaagacggcgaggaggagcccaaattccagcagccacgaccacctcaa
gtacccagcttgaccggatgcgaggatcatgggagcagcggaggaaccaagatgaagaaa
tttacgccaggaggcggagccgcgtccattgcgcgcaaaaactccaacaacaatgagctc
tggctcttgcaagacgaggactccgcacctctcagtgccagtggcagcacagcccccact
ctgtcacgccagagggatgctgctggcggtcgagacggctcagagtcagaccacaggagt
ggaggagacacagtgtcagaggcgggagtgataggagagggagctatcggtatgatatgc
aacaaaaacggagattgtagaagggacccgaccagttcagggagtctctcctctctcatc
tcaagacaggagaagcaggcagatggagtagtagcggcagcagaagacggcaaggggcag
gctgcgagcatggacggctctgtcacttcaccggggtccctgacacaggggcccggggcc
gaggtcaagacagcggcggcagcgatggagaagaaggactccagagtttccttctccaat
gccccaaccagtaaaggacagactccgagtcagcagtcgagaaattctgtcacattctcc
aaagccgaggacggctctcagatagtgccggacgatggagatgccagggggaatcagact
tacatgcagcgacagttcagttccatgcttcagcccggagttaacaaattctccctgcgc
atgtttggcagccagaaggcagtggaaaaagagcaagagcgcgtaaagtcagcgggtaat
tggattatccacccatacagcgacttcaggttctactgggacttcaccatgctgatgttc
atggtgggcaacctgatcatcatccctgtgggcatcaccttctttaaggacgagaccacc
acgccctggatcatcttcaacgtggtgtctgacaccttcttcctcatggacctggtcctc
aacttcaggacgggcatcgtgtttgaggacaacaccgagatcatcctcgaccccaaaaag
atcaagaagaagtacctgaagagctggtttgtggtggactttgtctcgtcaatacctgtg
gattatatctttctcatcgtggagaaagggatcgactcagaggtgtacaagacggccagg
gcgctccgcattgtccgcttcactaagatcctcagtctgctgcgcctgctgaggctgtcc
agactcatccgttacatccaccaatgggaggagatcttccacatgacctatgacctggcc
agcgctgtgatgcgaatattcaacctgattggtatgatgctgctgctgtgtcactgggat
ggctgtctccagttccttgttcccatgctacaggactttccatctgactgctgggtctcc
ctcaacaagatggtgaatgactcatggagcgagctctactccttcgccctctttaaggcc
atgagccacatgctgtgcattggatatggaagacaagctccagagagtatgtcggacatc
tggctgaccatgctcagtatgatcgtaggagccacctgctacgccatgttcatcggccat
gccactgcgctcatccagtctttggactcgtctagacggcaataccaggaaaagtacaaa
caagtggagcagtacatgtccttccacaaactaccggccgacttccgacagaaaatccat
gactactacgagcacaggtaccaaggcaagatgtttgatgaagagagcatcctggaggag
cttaatgagcctctgcgcgaggaaattgtaaacttcaactgtcgtaagctggtagcgtcc
atgccgctgtttgccaatgctgatcccaactttgtgactgccatgctgaccaaactgaga
tttgaagtcttccaacctggagactacatcatcagagagggcaccatcggcaagaagatg
tacttcatccagcatggggtggtcagcgtcctgaccaaaggaagtattggcatgaagctg
atggatggctcctactttggagagatctgtctgctgacccgaggcagacggacggccagt
gtgcgagcggacacctactgtcgcctgtactctctctctgtggacaatttcaacgaggtg
ctggaggagtaccccatgatgaggagggcctttgagacagttgccattgacagattggac
aggataggcaagaagaactcaatcctgatgcacaaagttcagcatgatctgaactcaggt
gttttcaacaaccgggagaatgagatgatccaggaaatagtcaaatacgatcgggagatg
gttcaacaggtgaatgtgccacgaccgcgagccatgtccatgacatctcctctacacggt
gggatctttacccctccgggttcctccacccagcctcagaattctgcaatcgccaccctg
cagcaggctgtagccatgaacttttgtccccccatgcaagggaactcaatgggagcaggg
aacctgcagtcccccaggatggttaggagattccaggtgatgcaaagtgtatccagccct
gtcccagcttcaccccttcagtctcagctccttgcttctggtgcctttgctccggtcctg
tccagcccccctgtccagagcccactggcagttggaggacgatcattccagtatgggtct
agtgccctggctggtcccacctcaggctcccagctttctcttacccagcagcacacagcc
agcccagcacaccggctcagcacacataagagcacccattccttgcaaatgggcagtctg
agccaagacgccagggcgctgtcagcctctcagccctcactgccccatgaggtggcacaa
ccaggcgcccctagtccaccccaatctacacgagtctcctccacctccattggaccccct
caggccgcatcaagtcacacaggcgtccggagcgctataccacatagggtggtactgccc
caccaaatgtctgtaggggccttccctgtagcatccctgcctggttctgggcagagtttt
ggggctgctgcaggtctggcggtgggaggtgtgggagcaagtctgggggaatcaggacta
cccaagaaggactctatagtgagccttcctgagacagaccacatcaaagtcagatccagg
ctatcctcaaacttgtga
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