Lates calcarifer (barramundi perch): 108877324
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Entry
108877324 CDS
T04895
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108877324
04121 Ubiquitin system [BR:
lcf04121
]
108877324
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108877324
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108877324
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108877324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
C1_2
Zn_ribbon_6
DZR
DZR_2
DUF7559
Motif
Other DBs
NCBI-GeneID:
108877324
NCBI-ProteinID:
XP_018522846
UniProt:
A0A4W6C6I7
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All DBs
Position
LG17:8980682..8986748
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AA seq
316 aa
AA seq
DB search
MAEAPPWPSRFFCHRCSAEISPRLPEYTCPRCESGFIEELLEERSADNGSMSTISSGPQN
QQPFENVDQHLFTFPSSYGQFALGVFDDSFDFGAGLGTEDNRDAENRREREAASRQRYGA
RQPRSRHGSRRQAGRHEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGVLHSNPMDYAWG
ANGLDAIITQLLNQFENTGPPPADRDKIKSLPTVQVTDEHVASGLECPVCKEDYSVGENV
RQLPCNHMFHNDCIVPWLEQHDTCPVCRKSLSGQNTATNPPELSGMNFTSSSSSSSSSST
PQSSSSTSNENSTDNS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcctccatggcccagccggttcttctgtcacagatgctcagcagagatt
agtcctcggcttcccgagtatacatgtccaagatgtgagtcaggattcattgaggagctg
ctggaggagagaagtgctgacaatggctccatgtctaccatctccagcgggccccagaac
cagcaaccatttgagaatgtggaccagcatctgtttacgttcccttcgagctacggtcag
tttgccctgggtgtctttgatgacagttttgattttggagctggactgggaacagaggac
aaccgggatgctgaaaacaggagggaaagggaagcagcatcacggcaacgatatggtgcc
cggcaaccaaggagtcgtcatggttcaagacgacaagcagggaggcatgagggagttccc
actttagaaggaatcattcagcagctagtgaatggaataattgcacctactgcaatgcca
aatattggtgtcggaccctggggtgttcttcattcaaatcccatggattatgcctggggt
gctaatggactagatgcaattataacacagttattaaaccagtttgagaacacggggcct
ccgcctgctgatagagataaaataaaaagtcttcctacggtacaagttacagatgagcat
gttgcttcagggctggaatgtccagtgtgtaaagaagattacagtgttggagaaaatgtg
aggcagctcccatgcaatcacatgttccacaatgattgcatagtaccctggttggaacag
catgacacttgtccagtgtgcaggaaaagcttgagtggacagaacacagcaacaaaccct
ccagaactatcagggatgaactttacctcctcctcctcatcctcttcatcctcatctacc
cctcagtcctcaagttcgaccagcaatgagaactccactgacaactcttag
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