Lates calcarifer (barramundi perch): 108877344
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Entry
108877344 CDS
T04895
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108877344 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
EGF_3
NODP
Ank_3
Ank_5
EGF_Teneurin
Ank_4
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
108877344
NCBI-ProteinID:
XP_018522861
UniProt:
A0A4W6FTT0
LinkDB
All DBs
Position
LG17:complement(10139536..10182894)
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AA seq
2503 aa
AA seq
DB search
MEQIPGFSSGKSLVFVFCFIPLSLALQCMDDNAPCVNNATCLTFTNGTEYCRCAPGFLGE
YCQHMDPCQPGYCLNGGNCSVSMLAGVPVPGSATCTCPLGFTGQHCKTPQNSTCYPNNPC
ANQGVCTLLSLDKYKCECARGWTGPRCEHEDSCLSSPCANGGKCSSLSAGSFTCSCPLGY
TGPRCLNDTNECAATPSICQNEGVCLNTLGSYKCNCAPGFTGRHCESSYIPCSPSPCLNG
GTCHQNSETSYSCHCLPGFNGTNCENNIDDCPGHQCANGGTCMDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLIGSYVCVCVNGWSGPDCSENIDDCATASCSPGSTC
IDRVASFICVCPHGKTGLLCHRDDACISNPCREGSQCDTNPISGMFNCNCPPGYVGSTCN
IDRDECSIGTNPCEHGGQCVNTDGSFTCNCVRGYAGPRCEQDVNECASNPCQNDGTCLDR
IGDYTCICMPGFEGTHCEIEVDECLSSPCLNQGKCLDQVSRFVCECPAGFSGEMCQIDID
ECSSTPCLNGAKCIDRPNGYDCECAEGFTGLLCEENINDCVPEPCHHGVCKDGIATYSCE
CHPGYTGSICNIQVQECHSNPCQNRGRCIDLVNAYQCNCPQGTTGLNCEINEDDCASNPC
EYGECHDGINEYKCVCAPGYTGVKCDVEINECNSNPCMSGGTCVDKVNGFHCLCPPSTHG
PLCLSGTDHCAPQPCVHGECIEQQHGYRCECEAGWVGQHCDQEKDECQPNPCQNGGTCLD
RHNGYTCMCQPGFRGVSCEKNIDECASGPCLNHGFCIDGVNSYTCQCSPPFTGKHCEVEQ
APCASHPCERGGVCHPSADYTSYTCRCPSGWQGQRCSDDVNECKNNPCRNGGHCMNSPGS
YTCKCQPGYSGHNCQTDIDDCSPNPCLNGGSCVDDVGSFSCDCRKGFKGERCETEVDECA
SQPCKNGAICQDYVNSFVCTCRPGFDGILCDHNILECTESSCLNNGTCIDDINTFSCHCR
PGFYGKFCEYEQNECDSQPCKNGGTCTDSLGTYRCTCPMGFSGQNCQNFVNVCSQVRCHN
GGSCSQTKTSWICHCKMGWTGLYCDVPNMSCQDFAARQGLEVENVCKNAGRCVNVGNTHQ
CQCQPGYMGSYCEEMVDECQSNPCRNGATCKDYQGTYECVCKPGYQGVNCEYDVDECHSK
PCLNGGTCINLINRFSCICPPGTHGLKCEVNEDDCAPKPGTFEPRCRNGGQCLDEVGRYK
CSCPQGFKGEHCEGDVNECNSKPCHAPGSLDCVQLVNNYQCRCRLGYTGRHCESMVDLCL
SKPCHNGGICSMNMSSVHGYICSCAPGFTGFSCDIEIGGHCARLHCQNGGRCVESPAGHL
YCQCQPGFTGLHCENEQRCLWNCQNGGTCIKDPSNPNQYSCRCPMNFSGRYCEKTLPMPS
PPTCPYPQCKQQSADKVCDDQCNNNECQWDGGDCSLNWQQPWINCTASVPCWDLFKNGRC
DKECDNPGCLFDSFECQETPPAICKYDKYCADHYQNGICDQSCYTEACGWDGLDCSTDSP
AQAAVGTLVIVVRLQPKELLGDLNGFLRSLGALLHTNLQVKRDKNNQPMVFPYYGVEDKK
GQHGQRNRNRRELDREVIGSEVHLQIDNRECSHSSVKCFSNTDEAASFIAAAHIKADLPY
PLVSVDSDLTPIDETPTLMYLIGVAVVIVLLILVLGMLAAKRKHKHGVLWLPDGFLANKN
DKRREPVGQDDFDMKNFKTQDGAMIDGGQNQRWLDEEVPSKKPRTEDKPLLPIAMDGGID
RREWTLQHRKAADITLTPPQADLDADCLDVNVKGPDGFTPLMLASLRNGGGPDCSLHGEE
EEESGGDEPGPSVISDLIAQGASLMAQTDRTGETALHLAARYARADAAKRLLDAGADPNA
HDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVEELIH
CHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEA
AQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGGNSV
MCGANGAGFIGMRPGPQGKKSRRGGGGAKVGGVGGGAKELKDMKAKRRKKPAGGEGTGVG
AGVGGGSGGGTGGGSANGVKAAGGLPESSVTMSPVDSLESPHSYTGDVSGAVSTTANSPP
LLSSPTSRPMLPPVSHMLGQQQGWVGMTKHGYSGHMFGLVPHQMGGSHPGMGQHHGQGPM
LTPMNVTMSREQLPPIVTFQMMAPGGGQAMLKQPQPGQVQVTQSQGQNQSQGHSQQAPSH
LHCPQSMMYQIPEQMSMPHGLSHTLQHPHTVGHGGIEGQSRQLPSYPPMQSPVDKYPTPP
SQHSYVTAGSEGTTPGHSAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLG
NPHHALPSSHHTHIPEQVQPQPQTQQMQQASQQPQLGNMQVFA
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatacccggtttctcctcgggcaagtcgctagtctttgtcttctgcttcatc
cctctctccttggctctgcaatgtatggatgataacgcgccctgtgttaacaacgctacg
tgtctgacctttaccaatggcacagagtactgcaggtgtgcacctggcttcttgggtgag
tactgccaacacatggacccttgtcaacctggctactgcctgaatggagggaactgctca
gtgtccatgttagctggtgttcctgtaccaggcagcgccacctgcacctgccctcttggc
ttcaccggacaacactgcaaaactccccagaactccacgtgttaccccaacaacccctgt
gccaaccagggtgtctgcaccctgctgtctcttgacaaatacaagtgcgagtgtgccaga
ggatggacaggaccacggtgtgagcatgaagacagctgtctatctagtccttgtgccaac
ggtggaaagtgcagctctctgtctgctggtagcttcacgtgctcctgtcctcttggctac
acaggtcctcgctgccttaatgacacaaatgaatgtgctgccacaccctcaatatgtcag
aatgaaggagtatgtctcaacacccttggctcgtacaagtgcaactgtgccccgggtttt
acgggccgacattgtgaaagctcatacatcccgtgctctccttcaccctgcctaaatgga
ggcacctgccaccagaactctgaaaccagctactcatgccactgcctcccaggtttcaat
gggactaactgtgagaacaacattgacgactgccccggtcatcagtgtgccaatggagga
acctgtatggacggtgtcaacacctacaactgtcagtgccctccagagtggactggtcag
cactgcacagaggatgtagatgagtgtcgtctgcagccaaacacttgccagaatggaggt
acctgcagcaacctgattggcagctacgtctgtgtgtgtgttaatggctggagtggccct
gactgctctgaaaacatcgatgactgtgccacagcttcatgcagcccaggctccacatgc
atcgaccgtgttgcctcttttatctgcgtctgccctcatggaaagacaggtttgctgtgc
catagagatgacgcctgtatcagtaacccctgcagagagggctctcagtgtgacaccaat
cccatcagtggcatgttcaactgcaactgtccacctggatatgtaggcagcacctgcaac
atcgatagagatgaatgcagcattggtaccaacccttgcgagcatggcggtcagtgtgtg
aacaccgatggctccttcacttgtaactgtgttaggggttacgctgggccacggtgtgaa
caagatgtcaacgagtgtgcttcaaacccctgccagaatgacggcacttgtctggatcgc
attggggactacacctgcatctgcatgcctggatttgaggggactcattgtgagatagag
gtggatgagtgtctcagctccccctgtctgaatcagggtaaatgtttggaccaagtcagc
cgctttgtctgcgagtgcccagcaggtttcagtggtgaaatgtgccagatagacattgat
gagtgctccagcacaccctgtttaaatggggccaagtgcatcgaccgacccaacggatat
gattgtgaatgtgctgaaggcttcactggtctcctttgtgaggagaacatcaatgactgc
gtacctgagccatgccaccatggtgtgtgtaaagatggcattgccacctactcctgtgag
tgccaccctggatacaccggctccatctgtaatatccaggtccaggagtgccacagcaac
ccctgtcagaaccgagggcgctgcattgacctggtcaatgcttaccaatgtaactgtcca
caaggaactacagggctaaactgtgagatcaatgaagatgactgtgccagcaacccctgt
gagtacggagaatgccacgacggcattaacgagtacaaatgcgtgtgcgccccaggatac
acaggagttaaatgcgatgtggagatcaatgagtgtaactcaaacccatgtatgagcgga
ggaacgtgcgtggacaaggtcaacgggttccactgcctgtgcccacccagcacccatggc
cctctgtgcctctctgggacagaccactgtgctcctcagccttgtgtgcatggagaatgt
attgaacagcaacatgggtaccgctgtgagtgtgaggctggctgggtgggacagcactgt
gaccaggaaaaggatgagtgccagcccaatccttgccaaaatggtggcacctgtttggac
cgacataatggctacacctgcatgtgccaacctggatttagaggtgtgagctgtgagaaa
aacatagatgaatgtgcatctgggccctgtctaaaccatggcttttgtatagatggagtc
aatagttacacgtgccagtgtagtccaccattcacaggtaaacactgtgaagtggagcag
gctccctgtgcctctcatccatgtgagagaggaggagtgtgtcacccatctgcagactac
acctcttacacctgtcggtgtcccagtggttggcaaggtcagcgctgcagtgatgatgtg
aatgaatgcaaaaacaacccttgcagaaatggtggtcattgcatgaacagcccaggcagc
tacacgtgtaaatgtcaacctggatacagcggacacaactgtcagacagacattgacgac
tgctcacccaacccatgcctgaatggaggttcttgcgtggacgatgttgggagtttctct
tgtgactgccgtaagggttttaaaggggagcgatgtgagactgaggtagatgagtgtgcc
agccagccctgcaagaacggtgccatctgccaggactacgtcaacagctttgtgtgcacg
tgccgaccgggctttgatggaatcctgtgtgatcacaacatccttgaatgtactgagagc
tcctgcctgaataatgggacttgcattgatgacatcaacaccttctcttgccattgccgt
cctggtttttacgggaagttctgtgagtacgagcagaatgagtgcgactctcagccctgt
aagaatggaggaacctgcactgacagcctgggcacctatcgttgcacctgccccatggga
ttcagtggacagaattgccagaactttgtaaacgtgtgcagccaggtccgctgtcacaat
ggcggctcctgttctcagacaaaaacctcctggatttgccactgtaaaatgggatggacg
ggactttactgtgacgtccccaacatgtcctgccaggactttgctgctagacaaggtctg
gaagtggagaatgtgtgtaagaatgctgggaggtgtgtaaacgtgggtaatacccaccag
tgtcagtgccagccgggatacatgggcagctactgtgaagagatggttgatgagtgtcag
tcaaatccttgtcgcaatggagcaacatgcaaagactatcagggcacctacgagtgtgtt
tgcaaaccaggctaccagggggtgaactgtgagtatgatgtggatgaatgccactctaag
ccctgcctcaatggaggaacctgtatcaatctcataaaccgcttcagctgcatttgccct
ccaggaacacatgggctaaagtgtgaagtgaatgaggatgactgtgcgcccaagcctggc
acctttgaacctcgctgtcggaacggaggacagtgtctggacgaggtgggccgttacaaa
tgctcctgccctcaaggattcaaaggcgaacactgtgagggagatgtcaacgaatgcaat
tctaagccctgccacgctcccggcagcctcgactgcgtgcagctcgtcaacaattaccag
tgtcgctgtcgactcggatacacgggtcgtcactgtgagtctatggtggatctgtgtctg
tctaagccatgccacaacggtggcatctgctctatgaacatgagctcagttcatggctac
atctgctcctgtgcccctggcttcactgggttcagctgtgacatagaaataggaggccac
tgtgcaagactccactgccagaatggtgggcgctgtgtggagtcaccagccggccacctt
tactgccagtgccagccaggcttcactgggctacactgcgagaacgaacagaggtgtctg
tggaactgccagaatggaggaacctgcatcaaagacccgtccaacccgaaccagtacagc
tgccgttgtcccatgaacttctctggacgatactgtgagaaaacactccccatgccaagt
cctccaacctgcccctatccgcagtgcaagcagcagtcagcggataaagtgtgtgacgat
cagtgtaacaacaatgaatgccagtgggatggaggcgactgctcacttaactggcaacag
ccttggattaactgcactgcctctgttccctgctgggatctctttaaaaatggacgttgt
gataaggagtgtgacaaccctgggtgcctcttcgacagctttgagtgccaggagacccca
ccggccatctgcaagtatgacaagtactgtgcagaccactaccaaaacggcatctgtgac
cagagctgctacacggaggcttgtggctgggacggcctggattgttctactgacagtcca
gcccaagcggcagtcggcacgctggttatcgtggtccggctgcaacctaaggagctgctt
ggagacttaaatggtttcttgcgctccctgggtgccctgctgcacaccaacctgcaggtg
aagcgagataaaaacaatcagccgatggtgttcccttactatggggtggaggataagaag
ggacaacatggacagaggaacagaaacaggcgggagctggacagggaggtcattggctct
gaggtgcacctacaaatcgacaaccgtgaatgttcccacagctcagtcaagtgtttctcc
aacacagatgaggctgcatcattcattgcagcagcacatatcaaggctgatctgccttac
cctctagtgtctgttgacagtgacctgacaccaatagatgagacaccaactctgatgtac
ctgattggagtggcagtagttattgttctgcttatcctggtgctggggatgctggcagcc
aagaggaaacacaaacatggtgtcctgtggctgcccgatggtttcttggccaataaaaat
gacaagaggagagagcctgtcggacaagatgactttgacatgaagaatttcaagacccag
gatggagccatgattgatggaggtcagaatcagagatggctggatgaagaggtcccatcc
aagaaaccaagaactgaagacaaacccttgctgcccatcgctatggacggaggcatcgac
cgaagggagtggaccctgcagcaccgaaaggctgctgacatcacgcttactcccccacag
gccgacctggatgctgactgtctggacgttaatgtcaagggacctgatggcttcaccccg
ctgatgttggcatcactacgtaatggtggaggtccggactgcagcctgcacggagaagag
gaggaagagagcggaggagatgaaccaggaccaagcgtcatttcagacctgatcgctcaa
ggtgcctcactgatggcccagactgaccgcacaggagaaacggcgctccacctggctgcc
cggtatgccagagctgatgctgctaagagactgctggatgctggagctgatcctaacgcc
catgacaacatgggcagaactcctctgcatgctgctgtggcggccgatgcccagggagtc
ttccagattctgatccgtaaccgtgcaacagagctggacgcccggatgaatgacggcact
actcccctgatcctggcagccaggctagctgtggagggcatggtggaagagctgatccac
tgccacgctgacatcaacgcagtagacgaccatggtaaatctgctctgcactgggcagct
gcagttaataatgtggaggctactcttgtgcttttgaagaatggagccaaccgtgacatg
caagacaacaaggaggagaccccactctttctggcagccagagaaggcagctttgaggca
gctcaggttctccttgaccactactccaaccgtgacatcactgatcacctggatcggctg
ccccgcgatacagctcaagaacgcatgcatcatgacatagtccgcctgctggaccagtat
aatctggttcacagtccacacaatgggcctaaccacatgggcggaggaggaaactctgtc
atgtgtggggccaacggagcaggcttcatcggcatgcgccctggaccacaggggaagaag
agcaggaggggtggaggtggggctaaggtgggaggtgttggcgggggagcgaaggagctg
aaagacatgaaggcgaagagaagaaagaagcccgctggaggtgaggggactggcgtgggt
gctggagtgggaggaggaagtggaggaggtacaggaggagggagtgcaaatggcgtcaag
gcagcgggaggacttccggaaagctctgtcaccatgtcacccgtcgactccctggaatca
ccacactcgtacacgggtgacgtgtctggtgccgtctccacaacagcgaactctcctccc
cttctaagcagccccacctccagaccgatgctgccccccgttagccacatgctgggacag
cagcagggctgggtgggcatgaccaagcacggctacagcggccacatgtttggcctcgta
ccgcaccagatggggggatctcaccctggcatgggccagcaccacggccagggcccaatg
ctgacccccatgaacgtcaccatgagcagagagcagctgccacctattgtcacatttcag
atgatggctcctggaggaggccaggccatgctgaagcagccacagccggggcaggtacaa
gtcacgcagtcccagggacagaaccagagtcaaggtcactcccagcaggcgccaagccac
ctccactgcccccagagcatgatgtaccagatcccggagcagatgagcatgccgcacggg
ctctcccacaccctgcagcacccccacaccgttggccacggagggatcgaaggccagtct
cgacagctgccctcctatccgcccatgcagagccctgtggataaataccccacgcccccc
tcccagcacagttacgtcaccgccggctcagagggcaccacccctggccactctgcccac
ccacccagcgagcacccatatctcaccccatcacccgaatccccagacccttggtcgtcc
tcttcgccacactccaactcagactggtctgacgtcaccaccagccccacccctctgggg
aacccccaccatgcactgccatcgtcgcaccacacacacattccagagcaggtgcagcca
cagccgcagacgcaacaaatgcagcaggcctctcaacagcctcagcttggaaacatgcag
gtgtttgcatag
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integrated database retrieval system
