Lates calcarifer (barramundi perch): 108877408
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Entry
108877408 CDS
T04895
Name
(RefSeq) prostaglandin F2-alpha receptor-like
KO
K04262
prostaglandin F receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108877408
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108877408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108877408
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Lipid
Prostaglandin
108877408
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
LHC
Motif
Other DBs
NCBI-GeneID:
108877408
NCBI-ProteinID:
XP_018522954
UniProt:
A0AAJ7PG31
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Position
LG17:10857191..10860992
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AA seq
369 aa
AA seq
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MSANESSESGCRSEVRLDNSTCTQKELSVTPSVISMTVGIFSNSLALFILAKSYNRIRIK
CRASFLLFASSLVVTDLLGHLISGSLVIFVYSSHKKWEMFDPHRIVCGVFGACLVFFGLS
PLFLGSAMAVERCIGVTRPIFHSTVLAPHHMKRLLVITWLLPALVAVLPVLLQRPYEVQI
SRSFCFFHTEKPKDWLDVFLPLLFSMLGLLALLLSIVCNALTSCVLLQARLRRKHHCRGT
SYHTEMICQLLAIMLVSCVCWGPLLIHVIILSTRATDEPTSLTLLTVVRMATWNQILDPW
VYILLRRAVLRKIFKLSRCCWGSTSQDLHSWQRSMLRSSIETSNSGAGPSACHCLSRLPP
PDTTIKSIT
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaatgagagctcagagtcaggctgcaggtcagaggtcagactggacaacagc
acctgcacacagaaggagctgtccgtcaccccctccgtcatctccatgactgtgggcatc
ttctccaacagcctcgccctattcatcctggccaaatcctacaaccgcatccggatcaag
tgcagggcgtccttcctgctgtttgccagcagtctggtggtcactgacctactgggtcac
ctcatcagtggctccctggtgatttttgtctacagctctcacaagaaatgggagatgttt
gaccctcaccgcatcgtgtgcggcgtctttggggcgtgcttggtgttcttcggcctgagc
cccctgttcctggggagtgccatggcggtggagcgctgcatcggtgtcacaaggcccatc
ttccactccaccgtgctggctccccaccacatgaaaaggctgctggttatcacatggctg
ctccctgccctggtggctgtgctgcctgtgctgctgcagagaccctacgaggttcagatc
tccaggagcttttgcttcttccacacggagaaacccaaagactggctggatgtgttcctg
cctctgcttttctctatgctcgggctgctcgcactgctgctctccattgtatgcaacgct
ctgacaagctgtgttctgctgcaggccaggctgcgccgcaagcatcactgcaggggcact
tcttaccacacagaaatgatctgccagctcctggccatcatgttggtgtcttgcgtttgc
tggggcccattactgattcatgtcatcattctcagcaccagagccacagacgagcccacg
tccctcactctgctgacggtggtacgcatggccacgtggaaccagatcctggacccttgg
gtctacatcctgctgaggagagctgttctgaggaaaatcttcaagttgtcccgctgctgc
tggggttcaacgtctcaagacctgcacagctggcagcgcagcatgctccgcagctccatt
gagaccagcaactctggtgccggcccgtctgcctgccactgcctcagcaggttacctcct
ccagatactacgatcaaatcaattacctga
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