Lates calcarifer (barramundi perch): 108877463
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Entry
108877463 CDS
T04895
Symbol
cbx3a
Name
(RefSeq) chromobox protein homolog 3a isoform X1
KO
K11586
chromobox protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108877463 (cbx3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108877463 (cbx3a)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108877463 (cbx3a)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108877463 (cbx3a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108877463 (cbx3a)
Heterochromatin formation proteins
HP1 (heterochromatin protein 1)
108877463 (cbx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_shadow
Chromo
Motif
Other DBs
NCBI-GeneID:
108877463
NCBI-ProteinID:
XP_018523026
UniProt:
A0AAJ7PG26
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All DBs
Position
LG3:complement(8360942..8363852)
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AA seq
182 aa
AA seq
DB search
MAQVAEHNMGKKQNTKGKRDSQESQEEPEEFVVEKVLDQRIVNGKVEFFLKWKGFTDADN
TWEPEENLDCPELISAFLESQKNIKEKPAPVKRKASTDEPETEAKRKDVAEKPRGFARNL
DPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQVVISFYEERLTWHSCPEDE
AQ
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagtagcagagcacaacatgggcaagaaacagaataccaaggggaagagggat
tcacaggagtcacaggaggaacctgaagaatttgttgtggaaaaagttctggaccagcgt
attgtcaatgggaaagtagaattcttcttgaagtggaaaggatttacagatgccgataat
acctgggagccagaggagaacttggattgtccagagctaatttcagcgtttttggaatca
cagaagaacattaaggagaagcctgctcccgttaagaggaaggcatcaacagatgagcca
gagacggaagcaaagagaaaagatgtggcagagaaacctcgtggctttgctagaaacctc
gacccagaacggatcattggtgcaacagacagtagtggggagttgatgttcttgatgaaa
tggaaagactcagatgaagcagatttggtcccagcccgtgaggcgaacacccgctgccct
caggtggtcatttccttctacgaggagagactgacatggcactcctgtccagaggatgaa
gcccagtag
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