Lates calcarifer (barramundi perch): 108877491
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Entry
108877491 CDS
T04895
Name
(RefSeq) acidic mammalian chitinase isoform X1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00520
Amino sugar and nucleotide sugar metabolism
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108877491
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
108877491
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Motif
Other DBs
NCBI-GeneID:
108877491
NCBI-ProteinID:
XP_018523077
UniProt:
A0AAJ7LGR8
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Position
LG12:9591542..9595147
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AA seq
497 aa
AA seq
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MTKLTILAGLCLVMCQLATASQMVCYFTNWSQYRPGTGKYMPQNVDPFLCTHLIYAFSII
NNKNELVTYEWNDETLYKTFNGLKSKNPGLKTLLAVGGWNFGSTQFSIMVSTPANRRTFI
QSSIKFLRTHGFDGLDLDWEYPGSRGSPPVDKQRFTLLCKELVEAYAAEAKATGKPQLML
TAAVSAGKGTIDAGYEIAEIAKHLDFINVMTYDFHGAWERFTGHNSPLYRGSHDSGDLIY
FNTDFAMKYWRDNGTPVEKLRMGFAAYGRTFRLTSSNTGVGASASGAASAGPYTREAGFW
SYYEICTFLKGTTIQWIDDQKVPYASKNNEWVGFDTRESYEIKVQYMRDMKYGGAFVWAL
DLDDFKGEFCGQGSHPLLSHLRKLIDTDMPPPPVTTTTKPSVTTTAPATTTTSKPVSTTA
APASTTTLKPSSTTKAPSTKTTIPVPGRGFCKDKPDGMYANPEDKSSFYICAGGRTYLRQ
CGVGTIFEESCKCCVWP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagctcactattctagcaggtttgtgcctggtgatgtgccagctggcaactgct
tcccagatggtgtgctacttcaccaactggtcccagtacagacctgggactgggaaatac
atgccccaaaatgtagatcccttcttgtgcacccatctgatttatgctttctccatcatc
aacaataaaaatgagttggttacttatgaatggaatgacgagaccctgtacaagaccttc
aatggcctgaagagcaaaaatcctggtctgaagacattattggctgttggtggatggaac
tttggctcaactcagttctccatcatggtgtccactccagctaaccgtcggacattcatc
cagtcctctattaaattcctgaggactcatggatttgatggtctggatctggactgggag
taccctggatctcgtggaagtcccccagtggacaaacagaggttcacgctgctctgcaag
gaacttgttgaagcctatgcagctgaagccaaggccaccggcaagcctcagctcatgcta
actgctgcagtgtctgctggaaagggaacaattgatgctggatatgagattgctgagatt
gccaagcatctggacttcatcaatgtaatgacctatgactttcatggagcttgggagcga
ttcactggacataacagccctctgtaccgtggctcacatgacagtggtgacctcatctac
ttcaacaccgactttgccatgaagtactggagagacaacggaaccccagtggagaagctc
aggatgggatttgctgcttatggtcgcaccttccgtttgacatcatcgaacactggcgtt
ggagcctcagctagcggtgctgcatcagctggtccttacacacgtgaagctggattctgg
tcttactatgagatctgcaccttcctgaagggcactaccattcagtggattgatgaccag
aaagtcccctatgccagcaagaacaatgagtgggtgggatttgacaccagggaaagctat
gaaatcaaggtccagtacatgagggacatgaagtatggcggtgcctttgtgtgggcattg
gatctggatgacttcaaaggagagttctgtggacagggaagccatcctctgctgtcccat
ctacgcaaactcatagacactgacatgcctcctcctccagtgaccacaaccacaaaacct
agtgttactaccacagcaccagctactaccacaacatctaaacctgttagtaccactgct
gcaccagcctccacaaccaccctcaaacccagcagcaccaccaaggcaccatccaccaag
accactatccctgttccaggacgtggcttctgcaaagacaagcctgatggcatgtacgcc
aaccctgaagacaagtccagcttctatatctgtgcaggtggccgaacctacctgaggcag
tgtggagtcggcactatcttcgaagagagctgcaagtgttgtgtttggccctga
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