Lates calcarifer (barramundi perch): 108877523
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Entry
108877523 CDS
T04895
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
KO
K10881
26 proteasome complex subunit DSS1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03050
Proteasome
lcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108877523 (sem1)
09124 Replication and repair
03440 Homologous recombination
108877523 (sem1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108877523 (sem1)
04131 Membrane trafficking [BR:
lcf04131
]
108877523 (sem1)
03051 Proteasome [BR:
lcf03051
]
108877523 (sem1)
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108877523 (sem1)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
108877523 (sem1)
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
108877523 (sem1)
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
108877523 (sem1)
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108877523 (sem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
108877523
NCBI-ProteinID:
XP_018523132
UniProt:
A0A4W6EJ59
LinkDB
All DBs
Position
LG3:8824765..8827190
Genome browser
AA seq
87 aa
AA seq
DB search
MIPVIHKQQHSDRRVAIMSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNW
DDDNVEDDFSNQLRAELEKHGYKMETS
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgataccggtcattcacaaacagcaacacagcgacagaagagttgctatcatgtcagac
aagaaacagaccgtggacctgggtttgctggaggaagatgatgagtttgaagaattccca
gccgaggactggacggggctggatgaagatgaagatgctcatgtttgggaagacaactgg
gatgatgacaacgtagaagatgatttctcaaatcaactgagagcggagctggaaaaacat
ggttacaaaatggagacgtcatag
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