Lates calcarifer (barramundi perch): 108877648
Help
Entry
108877648 CDS
T04895
Symbol
chst12a
Name
(RefSeq) carbohydrate sulfotransferase 12
KO
K04742
chondroitin 4-sulfotransferase 12 [EC:
2.8.2.5
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108877648 (chst12a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108877648 (chst12a)
Enzymes [BR:
lcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.5 chondroitin 4-sulfotransferase
108877648 (chst12a)
Glycosyltransferases [BR:
lcf01003
]
Unclassified
Sulfotransferases
108877648 (chst12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_2
Motif
Other DBs
NCBI-GeneID:
108877648
NCBI-ProteinID:
XP_018523269
UniProt:
A0A4W6D6S1
LinkDB
All DBs
Position
LG11:complement(16213087..16222422)
Genome browser
AA seq
415 aa
AA seq
DB search
MGTSRMFRIFIVLGSAFMILLIIIYWDDVGASHLYLHTPVSPGPKIPHPPPQQRPQTSRT
PSFLSDIDAFVNQFLEPGTGEPTDPVPVDTSNQSEKAEERYIPRREWKIHLTPVAAELRE
RQEQRRRLLQEMCANDSMVFSGKNRSFDDIPNKELDHLIVDDRHGIIYCYVPKVACSNWK
RIMIVLSESLQQDGVPQRDPLAIPRDLVHNSSMHFTFNKFWKRYGKFARHLMKVKLKKYT
KFLFVRDPFVRLISAYRNKFELRNEDFYRRFAQVMLRRYANQPTPPTSVDEAFAVGIHPS
FSHFIQYLLDPQTEKEMPFNEHWRQVYRLCHPCQIQYDFVGHLETAEEDAEHLLRQLRVD
NVVEFPTSHRNLTASSWEADWFSTVPVKARRELYKLYEPDFRLFGYDKPDSILNE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtccaggatgttccgcatcttcatcgtcctgggctcggccttcatgatcctc
ctcatcatcatctactgggacgatgtcggagcctctcacttgtatttgcacacgcccgtc
tcaccgggccccaaaatcccacaccccccaccccagcagcggccccagacctcccgaact
ccgtccttcctgtctgatatcgatgccttcgttaaccagttcttagagccgggaactggt
gagcccacagaccccgtccccgtcgacacaagcaaccaatcagagaaagcagaagagcgg
tacataccacggcgggagtggaagattcacctgactccagtggcagcggagctccgtgag
agacaggagcagcggcggaggttacttcaggagatgtgcgctaatgacagcatggtgttt
tctggcaaaaaccgttcatttgacgacattcccaacaaggagctagatcacctcatcgtg
gacgacaggcacggtatcatctactgctacgtccctaaggtggcgtgcagtaactggaag
cggatcatgatagtccttagtgagagcctgcagcaggatggtgttccccagagagacccg
ctggccatccccagggacctggtccacaacagcagcatgcactttaccttcaacaagttc
tggaaacgctatggcaagtttgcaagacacctcatgaaggttaagctgaagaagtacacc
aagtttctttttgtccgggacccctttgtacgtctcatctctgcctaccggaataaattt
gaactgcgcaacgaggacttttatcgacgctttgcacaggtcatgctgcgccgctatgcc
aaccagccaacaccccccacctctgtggacgaggcgtttgctgtgggtatccatccctca
ttctcccacttcattcaatacctcctggaccctcagacagagaaggagatgccctttaac
gagcactggcggcaggtgtatcggctctgccacccgtgccagattcagtatgactttgtg
ggccacttggagacggcagaagaggacgccgagcacctgctgcgccagctgcgggtggac
aacgtggtggaattccccacctcccataggaacctcacagccagcagctgggaggccgat
tggttcagcacagtacctgtgaaggcacggagagaactctacaagctgtacgaacctgac
ttcaggcttttcggctacgacaaaccggactcgatcctcaatgagtga
DBGET
integrated database retrieval system
