Lates calcarifer (barramundi perch): 108877649
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Entry
108877649 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: activating transcription factor 4b
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04137
Mitophagy - animal
lcf04141
Protein processing in endoplasmic reticulum
lcf04210
Apoptosis
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108877649
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108877649
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108877649
09143 Cell growth and death
04210 Apoptosis
108877649
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108877649
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108877649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108877649
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
108877649
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
PhiCb5_coat
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
108877649
NCBI-ProteinID:
XP_018523270
UniProt:
A0AAJ7LI54
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Position
LG11:complement(16141125..16144054)
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AA seq
458 aa
AA seq
DB search
MTMMMTNSQFGLEDMEALLWGPSSPMADAMGSLFFHPDQEENQEGGGTSLGGGHFTASPL
TSSSLSSSSSPPPFYSPPPSPPAVLLHGDKVGNESDLLSLPWLGHPGQLRCNQTVSDDKK
EETFGDLDWMAEKMDLSEFDLESLIGSCSPNEESPSSPEDLLASLDCPMELDSLPMPALS
TPVLPSLPSASLTNTLPPTLPSVCEDASVITVDDSQSYIDGQEAPSPPPCVPEPQEELEI
KSEPASPDPSSPLVDSSSSPVYTLDLGSEVDVSESEVKPVLAAVVPQVPSVPRLVLSLSP
TRIVLVLAPKNEVGIATATVTTTSEVVHSSPPATPPQRSSRSRPYPDPKYKASPSSPSAT
SVKVKSLRGAGGDEKVALKAPKDKKLKKMEQNKTAATRYRQKKRAEQEALSAEHAVLERK
NMELTEKAESMAREIEYLKELMEEVRLARIKKGLSADP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgatgatgacaaactcacagtttggcctggaagacatggaggcccttctctgg
gggccttcctctcccatggctgacgccatgggctcccttttctttcaccctgaccaagaa
gaaaatcaggaagggggaggaacctcacttggagggggacacttcaccgcgtcacccctc
acctcctcatcgctgtcttcttcctcctctcctcctcccttctactctcctcctccctcg
ccgccggctgtcctcctccatggggacaaagtcgggaatgagtctgacctgctctccctc
ccctggctgggccaccctggtcagctgagatgtaaccagacagtctcagatgacaagaaa
gaggaaacatttggtgacctggactggatggctgagaagatggatctgagcgagtttgac
ttggagtctctgattggctcctgcagtcctaatgaagagtcccccagctctccagaagac
ctcctggcctccttagattgccccatggagctcgactccctccctatgcctgctctctca
actcctgtgctcccaagtcttccctctgcttctcttacaaatacacttccccccaccctt
ccctctgtctgtgaagatgcttcagtcatcacagtggatgactctcagtcctacattgac
gggcaggaggccccctctcctcccccatgtgtcccagagccacaggaggagcttgaaatc
aaatctgagcctgcttctcctgacccgtcttccccattggttgattcttcttcctcccca
gtctacaccctggacctaggtagtgaggtggatgtctcggagagtgaggtgaagccagtg
ttagctgctgtggtccctcaggtcccttcggtcccaaggcttgtgctctccctctcccca
acccgcatcgtgcttgtgctggctcccaaaaatgaagtcgggatcgccaccgccactgta
accaccacatcagaggttgttcactcctcccctcctgccacccctccacaaaggtcctct
agaagcagaccataccctgatcccaaatacaaagctagcccatcctctcccagtgccacc
agtgtcaaagtcaagtccctccggggtgcaggtggtgatgaaaaggtagctttgaaggca
ccaaaggacaagaagctaaagaagatggagcagaataagacggccgccacgcgctacagg
cagaaaaagagggcagagcaggaagcgctttctgcagagcatgcagtgctggagaggaag
aatatggagctgactgagaaggctgagtccatggccagggagatcgagtacctcaaggag
ctgatggaggaggtccgcctggccaggatcaaaaaaggtcttagcgccgacccctag
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