KEGG   Lates calcarifer (barramundi perch): 108877703
Entry
108877703         CDS       T04895                                 
Symbol
tpm2
Name
(RefSeq) tropomyosin beta chain isoform X1
  KO
K10374  tropomyosin 2
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04260  Cardiac muscle contraction
lcf04261  Adrenergic signaling in cardiomyocytes
lcf04814  Motor proteins
lcf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    108877703 (tpm2)
   04820 Cytoskeleton in muscle cells
    108877703 (tpm2)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    108877703 (tpm2)
   04261 Adrenergic signaling in cardiomyocytes
    108877703 (tpm2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108877703 (tpm2)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     108877703 (tpm2)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ PUMA_CC Laminin_I ATG16 XhlA Nuf2_DHR10-like ERM_helical GAS CENP-F_leu_zip Crescentin DUF745 TMF_DNA_bd SlyX MscS_porin Fib_alpha DUF1664 Lebercilin DUF16 DUF7169 DUF6317 FPP DUF5917 Fez1 TMP_N CCDC22_CC
Other DBs
NCBI-GeneID: 108877703
NCBI-ProteinID: XP_018523333
UniProt: A0A4W6FDZ3
LinkDB
Position
LG9:20304426..20323660
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAEGDKKGAEDKCKQLEEELLGLQKKLKGVEDELDKY
SESLKDAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGDLERSE
ERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaagaaaatgcagatgctgaagctggataaggagaacgcaatagac
cgggcagaacaggctgagggggacaagaagggagcggaggataaatgcaaacagctggag
gaggagctgctgggtctgcagaagaagctgaaaggtgtagaggatgagctggacaaatac
tcagaatcgctgaaggatgcccaggagaagctggagcaggcagagaaaaaggcaacagat
gctgaggcagaagtggcatctctgaacaggcgtatccagctggtggaggaggagttggac
agagctcaggagagactggcgactgctctgcagaagctggaggaggctgagaaagctgca
gatgagagtgagagaggaatgaaggtcatagagaacagagcaacaaaagacgaggagaaa
atggaaatccaggagatgcagctgaaggaggccaaacacattgctgaggaggccgaccgc
aaatatgaagaggttgcacgcaaactggtgatccttgagggtgatctggagcgttcagag
gagcgtgctgaggtggccgaggctaaatcaggtgaccttgaggaagagttgaaaaatgtc
accaacaacttgaagtcactggaagcccaggctgagaagtactcacaaaaggaagacaaa
tatgaagaagaaataaaagttctgactgacaaacttaaagaggctgagacccgtgcagag
tttgcagagcggtctgtggccaagctggagaagaccattgatgatctggaagatgaagtt
tatgctcagaagctgaagggcaaggctctgagtgaggagctggacctggccctgaacgac
atgactacactgtag

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