Lates calcarifer (barramundi perch): 108877724
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Entry
108877724 CDS
T04895
Name
(RefSeq) sorting nexin-13 isoform X3
KO
K17925
sorting nexin-13
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108877724
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108877724
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
108877724
NCBI-ProteinID:
XP_018523375
UniProt:
A0A4W6EYS8
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Position
LG3:complement(9401229..9422338)
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AA seq
954 aa
AA seq
DB search
MFAEASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFIGGGFAVTLLYGKINSEKHLE
KCEHSYLPPTQIGILKTLDEMKLEMKPIKIDRRLTGSSFIDEPLQQVIQFALRDYIQYWY
YTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQDRLA
DREDKQRDITEELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLRDLCELLLYLLLPPGD
FHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDKP
AELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLQSGKEVDAL
KLAANFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVEGYRVTAQQQLEAM
QVWQRDGKKQPSATKGLLKAAALGVYEQYLSDKASPRVQVDEVSVTKLGEKLQKDDPTPE
IFDEIQRKVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSDDGDGESFNGSPT
GSINLSLDDLSNSCHDESMHLHAFISDTGVCNDHGKTYALYAITVFRRNPDGSEDCWKTY
RRYSDFHDFHMRITEQFENLASILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNPEMV
KACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLRSSMRNMSNAVKALPDSLAEGMT
KVSDNMGRMSERLGQDIKQSILKVPPLLPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLL
MDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYLTSPEQVADYVKKFRD
SYWPNGILAETPPRRDKSIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQ
YQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIHRYSQKLKSSSLKR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtccatctggggatgggggggtcttggagtcgtgcttttc
ctcgtcacttttggaccctttgccatattctacctggccttttatatcttctgcttcatt
ggagggggctttgcggtcactctgctctatgggaagatcaactccgagaaacacctggaa
aaatgcgagcattcttacttgccacctacacagattggtatactgaagacattggatgaa
atgaagctggagatgaagcctataaagattgacaggagactgactggctccagtttcata
gatgaaccactacagcaggtgatccagttcgctctgagagactatatccagtactggtac
tacactctgagtgaggatgaatccttcttattggagatcagacagacgctgcagaatgcc
cttgtccagttctccacacgatccaaagaggtggactggcagccttacttcaccactcgc
ctggtggacgactttgccacccatttacgtgtcttcagaaaagcccaggatcgcctcgca
gacagagaggacaagcaaagagacataacagaggagctggtggactcgttcttcgaggcc
gaggtggagatggagaggaagatttgtcgagacgtagtgtgcacttcacataaagacgaa
gagggtttccttcgggatttgtgtgagttgcttctgtatctgttactacctcctggagat
ttccacaacaagaacatgagatactttttaagggaggtgcttgcgcgtggtgtgctgctt
cctctgatcaaccagctgagcgacccagactacatcaaccagtttgtcatctggatgata
cgggactccagctgtaactatgaagccttcatgaacatcttgaagttgacagacaagcct
gctgagctggaggccgtcaaggacaaggtgctggaggaactgcagtacctccgctctctg
gacactgcaggagatgacatcaatgtgatcaagaaccagattaacagtcttctgtttgtg
aagaaggtgtgtgagaccaggatccagaggctgcagtctggcaaggaggtggatgccttg
aagctggcagccaactttggcaagctgtgcgttatcccactggatcacatcctcgtccac
aacatagccctgcagttcttcatggacttcatgcaggcagcaggggcccaggcggagctg
tttttctggctcactgtggagggctacagggtgacggcacaacagcagctggaggccatg
caggtctggcagagagacggcaagaagcagcccagcgccaccaagggactgctgaaggct
gctgcactgggtgtctatgaacagtacctctctgacaaggcgtctcccagggtgcaagtg
gatgaggtgtctgtgacaaaactgggagagaagctgcagaaagatgatcccacaccagaa
atatttgatgaaatccagagaaaggtgtatgacatgatgctacgcgatgaacgttactat
ccctccttcaagcagagccctctgtacgtccgcatgctagcagagctggacatgttgaaa
gagccgagctaccggggatccgatgacggtgatggagaatcttttaatggttctccaaca
ggaagcataaatctatccttggacgacttgtccaactcctgccatgatgaatctatgcac
ctacatgccttcatctctgacacaggggtttgcaacgaccacggtaagacctacgcgctg
tacgccatcaccgtattcagacgcaacccggatggcagcgaggactgctggaagacctac
cgccgctactcagacttccacgacttccacatgaggatcactgaacagtttgagaatctg
gcgtcgatcctcaagctgccaggaaaaaagacgttcaacaacatggacagagacttcttg
gagaagagaaaaaaagacctcaatgcttacctacagttgctgctgaacccagagatggtg
aaggcctgcccaactctgattccttatgtctacgacttcctagaaaacaaggcctacagc
aagggcaaaggagagtttgcacgaaagatagacacatttgtaaatccattgaggagctcc
atgaggaacatgtccaatgcggtgaaagccctgccagacagtctggctgagggcatgacg
aaggtgtctgacaacatgggccgcatgtcagaaagactgggccaggacatcaaacagtcc
atattgaaggtgcctccactcctccccaagtctgacatcgaccccgaacactgtcgtgtc
tccgcccagctcgatgacaacgtggacgataatatcccgctgagggtaatgctgctgctg
atggacgaagtgtttgaccttaaggagaaaaaccagtggctgcgcaggaacattaagaac
ctgctgcagcagctcatcagagccacatatggagacaccatcaacaggaaaattgtagat
catgtggactacttgacctcaccagaacaggtggcagactatgtcaagaagttcagggat
tcctactggcccaacggtatactggctgagacaccaccccgtcgggacaagagcatccgc
atgaggacacgagtagctgccaaaaccaacctgctgggtatcatgccagatgagctgaag
cacatcattggagcggacaccacgagaaagggcatcctgcgcgtcttcgacatgtttcag
taccaacccatgaaccgtcggctagtctacgttttcctggagggcttcctggagacaatg
ttcccccagtacaaattccccgagctctttgtcaagctgcactcccgctcgccgcgcatc
cacagatacagccagaaactcaaatcctcctctctgaagaggtga
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