KEGG   Lates calcarifer (barramundi perch): 108877749
Entry
108877749         CDS       T04895                                 
Name
(RefSeq) transcriptional repressor CTCF
  KO
K23195  transcriptional repressor CTCF
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108877749
   03036 Chromosome and associated proteins [BR:lcf03036]
    108877749
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    108877749
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    108877749
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_16 zf-H2C2_5 zf-C2H2_jaz zf-C2H2_7th_ZNF462 Zf-C2H2_ZNF451 Zf-C2H2_ZNF451_C Roughex zf-met LIM zf-C2HE RXT2_N zf-C2H2_6 zf-C2H2_15 zf-WIZ
Other DBs
NCBI-GeneID: 108877749
NCBI-ProteinID: XP_018523407
UniProt: A0AAJ7LJH7
LinkDB
Position
LG2:29119207..29127261
AA seq 764 aa
MEGEVVSMETTQTAEGKVLPEGREALQGAAMAPQGEVVGNMEMMVMDALDPALLQMKTEV
LEGGSTVTVTGGDEGQIITLQVVNMEEQAGAGLGLGQLQLVQVPVTTTTVEGLQATYVDA
STANKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHDELQRTRGEGEEEEEE
EAAEVEPPAAQEEDPEWSKDPDYQPITTVRKGKKGKKSRLRYAEGDRDMDVSVYDFEEEQ
QEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDER
PHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFK
CSMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYIC
HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYC
DAVFHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTF
RQKQLLDMHFKRYHDPNFVPTAFVCSKCSKTFTRRNTMLRHAENCTGEVGEENGTPTPKK
SRRGRKRKMQARADDDDDDDDDDDDTEGDLDEAEEEEEDLLTEIEVEQAPPVVPIPAPVE
PPVKRKRGRPPKNKPDTAAIIRVEDEATGEVDDIIVKKEVGADQDDQDDGNEDAAEGVVV
GGVKSTIQMEELSQEEGTAQEAQLSGAPPNGDLTPEMILSMMDR
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggagggcgaggttgtttccatggagaccactcagactgcagagggaaaggtcctgcca
gagggcagagaggccttacaaggggcagccatggccccacagggtgaggtggtaggtaac
atggagatgatggtgatggacgctctcgatccggctctgctgcaaatgaagacagaggtg
ttggagggaggcagcacagtgactgttaccggtggagacgagggtcaaatcatcacactc
caggtggtgaatatggaggagcaggcaggtgctggactggggcttggtcagcttcagctg
gttcaggtaccagtcacaacaacaactgtggagggcctccaggccacatacgttgatgca
tcaactgcaaacaaggatgcagagccggttatctgtcacactcttcccttgcctgagggc
ttccaggtggtaaaagtgggtgccaacggtgaagtggagaccgtagagcaggaggagctc
caggcagcccatgatgagcttcagaggacaagaggagagggggaggaagaagaagaagaa
gaggcagcagaagtagaaccccctgcggctcaggaagaagaccccgaatggtcaaaggac
ccagactaccagcccatcaccactgtccgcaaaggaaagaagggaaagaagagtcgcctg
cgctatgcagagggtgaccgtgacatggatgtgtctgtgtatgactttgaggaggagcag
caggaagggctgctgtcagaggtcaatgctgagaaggttgtgggcaacatgaagccacca
aagcccaccaagatcaagaaaaaaggtgtaaagaagactttccagtgtgagctgtgtagc
tacacctgtccaaggcgctccaacctggaccgacacatgaagagccacacagatgagagg
ccacataaatgtcacctgtgtggaagggcctttagaacagtcacactgctgagaaaccac
ctcaacacacacacaggcactcggccacataaatgcactgactgtgacatggcattcgtg
actagcggcgagttggtgcgtcatcgtcgctacaaacacacacacgagaaacccttcaag
tgctccatgtgtgactattccagcgtggaggtgagcaagttgaaaaggcacatccgctct
cacacaggggagcgacccttccagtgcagtctgtgcagctatgccagcagagacacttac
aagctgaagagacacatgaggacacattcaggtgagaagccatatgagtgttacatctgc
catgctcggttcacacagagcggcaccatgaagatgcacattctgcagaaacacacagag
aatgtggccaagttccactgcccacactgtgacactgtcatcgctcgcaagagtgacctt
ggcgttcatttacggaagcagcactcgtttattgagacggggaagaaatgtcgttactgt
gatgctgtatttcatgagcgctatgccctcatccaacaccagaagacccacaagaatgag
aaacgtttcaagtgtgaccagtgtgactactgctgcagacaggaacgccacatgataatg
cacaagcgtacacacacaggggagaagccatttgcctgcagccagtgtgagaaaactttc
cggcaaaagcagctcctggacatgcacttcaagcgctaccatgatcccaactttgtcccc
actgccttcgtttgcagcaagtgtagcaagacgttcacccgcaggaacaccatgctacgt
catgctgagaactgcacaggtgaagttggagaagaaaatggaacacccacacccaaaaag
agccgtcgtggcaggaagaggaaaatgcaggccagggcggatgatgatgacgacgacgac
gacgatgatgatgacactgagggtgatttggatgaggcagaggaggaagaggaggatctg
ctaactgagattgaggtggaacaggctccaccagtcgtccccatcccagcccctgtggag
ccaccggtcaagagaaaacgtgggcgacccccgaagaacaagccagacaccgctgccatt
atccgtgttgaggacgaggccactggagaggtggatgacatcattgtgaagaaggaggtc
ggagctgaccaagatgaccaggacgatggcaacgaggacgccgcagagggggtggtggtt
ggcggggtgaagtcaaccattcagatggaggagctgtcccaggaagaggggacagcacag
gaggcacagctgtccggagccccacctaatggagatctgacccctgagatgatcctcagc
atgatggaccggtga

DBGET integrated database retrieval system