KEGG   Lates calcarifer (barramundi perch): 108877774
Entry
108877774         CDS       T04895                                 
Symbol
polr1f
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA43
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108877774 (polr1f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcf03021]
    108877774 (polr1f)
Transcription machinery [BR:lcf03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     108877774 (polr1f)
SSDB
Motif
Pfam: RPA43_OB SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 108877774
NCBI-ProteinID: XP_018523459
UniProt: A0AAJ7PGV7
LinkDB
Position
LG3:complement(9449539..9453121)
AA seq 382 aa
MANFEHAEDDPKHVKMSGETPAACDQVQPAELSSVPGRDAGAVPCSIPSFAAASELLSAP
YSCLVMNTHRRHIALPPVYLNKKRTGIQTELEAELLKFSQSLKGVPLAYDNIRIVGQHGN
IYDDSGYIHMDVEANFILFQPKKGQKLLGKVNKLGVSHVGCLVHGCFNASIPKPNLVSVE
TWRDAGPRIGAELEFEVTALDADAAGVLLIRGRLDRTRVQELMAMGESSESSVPAEQIDG
AEPNPETTEESPGDTPKKKKKKKKDKIKEEEREDEVMPSCQQNSSTTPELNGTTDEANGN
EAGEEKKKKKKKKKEKGVKEEQEEVELSPMEVHGSDSSGYVSDKPSKKRKHETGSDVTSG
FSEDPEPPKSKKKRKSNIEQFA
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggcgaacttcgagcatgctgaagacgacccaaaacatgtgaaaatgtctggtgaaacc
cccgccgcctgcgaccaagtccaaccggccgagctgtcctccgtaccgggcagagatgcg
ggtgcggtcccgtgctctatcccgtctttcgccgccgcctccgaactgctgtcagctccg
tactcgtgtctggtcatgaacacgcatcggagacacatcgccttaccgcccgtatacctg
aacaagaagaggacaggtatacagacggagctggaggccgagctactcaagttctcccag
agtctgaaaggagtgcctttagcttatgacaacatcaggatagtgggccagcacggaaac
atctacgacgacagcggctacatccacatggacgtagaggccaactttatcctgtttcag
cccaaaaaaggacaaaaactgctgggtaaagtgaataagttaggagtaagccacgtgggc
tgcctggtgcacggctgtttcaatgccagcatccccaaaccaaacctggtctctgtggaa
acctggagggacgcggggccgaggatcggagcagagctggagtttgaggtgaccgcactg
gatgcagatgccgcaggggtgctgctgatcagaggtcgactggacaggaccagggtccaa
gagctgatggctatgggtgagagctcagaatcgagcgtccctgcagagcagatagatgga
gcagagccgaacccagaaaccacagaggagtctcctggcgacacccctaagaaaaagaag
aaaaagaagaaagacaaaatcaaagaggaggagagagaagacgaggtaatgccctcctgc
caacagaacagtagcacaaccccagagctgaacggaacgacggatgaggcaaacggcaac
gaagctggtgaggagaagaagaagaagaagaaaaagaagaaggagaaaggcgtgaaagaa
gagcaggaggaggtcgagctctctcccatggaggtccacgggagcgactcgagcggctac
gtcagcgacaagccaagcaaaaagaggaaacatgaaactggtagcgatgtcacatctggt
tttagtgaagatcctgaaccaccaaaatccaagaagaagaggaaaagcaacattgagcag
tttgcctga

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