Lates calcarifer (barramundi perch): 108877791
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Entry
108877791 CDS
T04895
Name
(RefSeq) transcription factor Sp4 isoform X1
KO
K09194
transcription factor Sp4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108877791
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
108877791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
Zap1_zf1
zf-C2H2_8
DUF7376
Motif
Other DBs
NCBI-GeneID:
108877791
NCBI-ProteinID:
XP_018523494
UniProt:
A0AAJ7PGH4
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Position
LG3:9528538..9536011
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AA seq
772 aa
AA seq
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MSDSKKESSGTEGGKASKKGKSSGSQDSSQPSPLALLAATCSKIGGQGGVEGVQAQAGAQ
QIQVQAGQIQLQAGQLQGQIVVDAAGGQALVPQQLELVPAQFTGNGWQIITAAPTMAKEN
TNQPVAVTVATTLANDSSPGGRKVREVKAVGGTNSVAANQQQQQQFQIIQVQNLPNAGGG
VQYQVIPHLQTADGQQIHISPAQTASIGALPEQVQLIQTPSPGQTQAILQPANQQAILTS
TANQTVPLQIRPAQSFPLQLQTLPSSQTPVMTTVPINLGGMTLALPVINNVGGGGAVQLI
QSADGTFSVANGNQLVTTAVSGAAPPAASTGSTTAVAEGDSVSDGAQVVSAGSEGGPADT
QVQSSEADSQSQNQANGLQNQTDTAGTIQQVIVGQVGHQLVQQIQLQPQAQSQGQAQGQQ
QPQHIQTLQLAPGQTLQPIQAFQNPAQVLIRTPTLSPSGQITWQTLQLPGGVSLQGGLGT
AVPQQLTLAPVAGGTTVGSGGLVSLSGAPLTLSAAQINPGSGVQTVSIAGLGTAGVQVQG
VPLTITGLQGQPQGQDGVKVQSSPVTVTVGNVPSGSSMSPDQLGSVQSSSDQEGPPSKRL
RRVACSCPNCRDGEGRNSGDPTKKKQHICHMEGCGKVYGKTSHLRAHLRWHTGERPFVCN
WIFCGKRFTRSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHIKTHQNKKGGAAVAI
ITTEDMEEDTPEGLGASPQIVAVATLSRDSDPATPTTSNHLEEEEEEEEEFE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactcgaagaaggaatcatctggaactgaaggagggaaagcatcaaaaaagggg
aaaagttctggatcgcaggattcctctcagccctctccgttggctctgctagcagccacc
tgcagtaagatcggagggcaggggggagtggagggggtccaggcccaggcaggggcccag
cagatccaggtccaggccggtcagatccaactgcaggcgggtcagctccagggtcagata
gtggtggacgcagccgggggtcaggccctggtgccccagcagctggaactggtcccagct
cagttcacggggaacggctggcagatcattacagcggctcctactatggccaaggagaac
accaatcagcctgttgcagtgacggtggccaccaccttggctaacgacagctcacctggt
ggacgcaaggtgagggaggtgaaggcagtaggtgggaccaacagtgttgcagccaatcag
cagcagcagcagcagttccagattatccaggttcagaacctgcccaatgctgggggcggg
gtccaatatcaggtcatccctcatctgcagactgcagatggacagcagatccatatcagc
ccggctcagacggcctccatcggggctctaccggagcaggttcagctcatccagacccct
agccctggccaaacccaggccatcctccagccagccaaccagcaggccatcctgacaagt
acagccaatcagacggtccccctgcagattcgccccgcgcagtctttcccgctgcagctg
cagactctgccgagctcccagactcctgttatgaccacagtacccataaacctcggtggc
atgaccctggctctgcctgtgatcaataatgtcggagggggtggggctgtgcagcttatc
caatcagcagatggcacattctctgttgccaatggcaaccagctggtgacaacagcagtg
tctggagcggctcctcctgcagcatcaactggctcaacgacggcagtagctgaaggtgac
agtgtgtctgatggggcacaagtggtttctgcaggatcagagggtggaccagctgacacc
caagtacagagcagtgaggcagactctcaaagccagaaccaggccaacggactgcagaac
cagacagacacagcaggaaccatccagcaggtgatcgtgggccaggtggggcaccagttg
gtgcagcagatccagctgcagccccaagctcagagtcagggtcaggcccagggccagcag
caacctcagcacattcagaccctccagctagcccccgggcaaaccctccagcccatccag
gccttccaaaacccagcccaggtccttattcgcaccccgaccctgtccccctctgggcag
atcacctggcagacgctgcagctgcccggtggggtctccctgcagggcggcctggggaca
gctgtgccacagcagctgacactggccccggtggctggtgggacaacagtggggagtgga
gggctggtctccctgagtggagctcccctgacgctgagtgcagcccagataaacccgggg
tcgggggttcagacggtcagcatcgcaggcctgggcactgctggggttcaggtgcagggt
gttcccctcaccattaccggtctacagggtcaaccacagggtcaggatggggtcaaagtc
cagtcgtctcccgtaaccgtcactgttggcaacgtaccatcaggctcgtcaatgagtccg
gaccagctaggctccgtacaaagttcttcagaccaggagggaccgcccagcaagaggctt
cgacgtgtcgcctgctcttgtccaaactgcagggatggagagggaaggaatagcggggac
cccacaaagaagaagcagcacatctgccacatggagggctgcgggaaggtgtatggcaag
acgtcccacctgagggctcacctgcgctggcacaccggcgagaggccgttcgtctgtaac
tggatcttttgcggcaagaggttcaccaggagcgacgagctgcagagacaccggagaaca
cacacaggagagaagcgcttcgagtgtcctgaatgctccaagcgcttcatgcgcagtgac
cacctgtccaagcacatcaagacccaccagaacaagaagggtggagccgcagtggcaatc
atcaccactgaagacatggaggaggacacccctgaaggcctgggcgcctcccctcagatt
gtcgccgtggcgaccctctcccgtgactctgaccccgctacacccaccacctctaatcac
ctggaggaagaggaggaggaagaggaggagtttgaatag
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