Lates calcarifer (barramundi perch): 108877829
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Entry
108877829 CDS
T04895
Symbol
ppfibp2a
Name
(RefSeq) liprin-beta-2 isoform X1
KO
K27096
liprin-beta
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108877829 (ppfibp2a)
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108877829 (ppfibp2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
FxsA
Filament
Crescentin
Motif
Other DBs
NCBI-GeneID:
108877829
NCBI-ProteinID:
XP_018523549
UniProt:
A0AAJ7PGH8
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Position
LG2:27882856..27900288
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AA seq
911 aa
AA seq
DB search
MEYDIDFYKHFAWLRKVNLQSNGNSESYQERLSRLEGDKESLILQVSVLTDQVEAQGVKI
SDLESSLVEHQHKLNSTEEMLQQELLHRTSLENQKLSLMGEVSYLKLKLADMEGKQGHGA
ERQHKAETVVNFISELQEQMCRFQKEINSKIQEKKASEMPSDSSSSAVCPAEPTGGKGSN
PGPPCDRTSRVMHELEEAPDGPDGNTHSLEELGSSDAEQQYHCGGESGLLKELRILKDKV
EHLEDQKLQYEKKLKATKAEISSLQQLLLSKNAEIESLHTQLLARPTLSTESSEREEMYR
KRLNAKYQELQRLKSGMKSLVASNDEKDRRIEELTLLLNQCRQFREVTHTTRQAPPAVRS
LSNGRTPSSSSEEEEQGLMKNTDSGSAKSEDVKSEVSTNSSSSQQTSLLSVQKDSDSRTE
PQTLSSSMNDLTNGPSQKNGLDDTRSQTLPVNSSLSEQNGIGGSSGEIQSHRTPDGSEDG
DSSQRKLEKVDDSTSSNNSPAHSGASTQPGQRTVGSPEYMKNNRSFKRLWGKLRRTQSGG
LQAADPDAGQFKRGGLRATAGPRLTRTPESYDSARDMNIPFSQWTKEQVCGWLEDYGLGQ
YVSLSRQWVENGQTLLSATPQDFEKEMGMKNPLHRKKLQLALRAFTTKVIEKSSELDHIW
VTRWLDDIGLPQYKDQFHEARVDGRMIQYLTVNDLLTLKVTSQLHHLSIKCAIHVLHANK
FNPHCLRRRPGEEKQPTPSEVVQWSNHRVMEWLRAVDLAEYAPNLRGSGVHGGLIILEPR
FSSETLALLLNIPPQKTLLRRHLATAFSALVGPQATQEKREYGNATGHVPLTTTAKVKPK
KLGFTQFSHLRKRKPDESADYICPIDSGALTMNGVSRLPSAALRGLSPSLDRQAERREQI
GIKAEANGLKQ
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgacattgacttctacaaacactttgcctggctcagaaaggtaaacctccag
tcaaacggcaacagtgaatcctaccaggagcggttatcacgtctggagggagacaaagag
tcactaattctgcaggtgagtgtgctgacagaccaggtggaagctcagggggtgaagatc
agcgatctagagagttctctggtggagcatcagcacaaactcaactccacagaggagatg
ctacagcaggagctcctgcataggacgtcgctggagaaccagaagctgagtcttatgggg
gaggtgtcctacctgaaactaaagctggcagacatggagggaaaacagggccatggggct
gaaaggcagcacaaagcagagaccgtggtgaatttcattagtgagcttcaagagcagatg
tgcaggtttcagaaggagatcaatagcaagatccaggagaaaaaggcctcggagatgccg
tctgacagcagctcttcagcagtgtgccccgccgagcccactgggggcaagggctcgaac
cccgggccaccctgtgacagaacctcaagggtgatgcacgaactagaagaggctccagat
gggcctgatgggaacacacacagcctggaagagcttggtagctcagatgcagagcaacag
taccactgtggaggagaaagtggcttactcaaggagctcaggatccttaaagacaaagtg
gagcacctggaggatcagaagttacaatatgagaagaaactcaaagcaacaaaggcagag
atcagcagccttcagcagctcctgctcagcaagaacgctgagatcgagagcttgcacact
cagctgctggccagacccactctatccacagagagctcagagagagaggaaatgtacagg
aagaggctaaacgccaaatatcaggaactgcagaggcttaagagtggcatgaaatcactg
gttgcttccaacgatgaaaaggaccgacgtattgaagagctcactctgctccttaatcag
tgcaggcaattcagagaggttactcacaccacaaggcaagctccacctgctgttcgttca
ttgtcaaatggcaggactccttcaagcagcagtgaggaggaggagcaagggctgatgaag
aatactgactctggcagtgcaaaatccgaggatgtaaagtctgaagtttccacaaacagc
tcctcctcccaacaaacgtcacttttatcagtccagaaggatagtgattctagaacagaa
ccacagactctgtcaagtagcatgaatgacctgacaaatggaccttcacaaaagaatggt
ctggatgacaccagaagtcagacgttgcctgtgaattcctctctgtcagagcaaaatggg
atcggaggcagcagcggtgaaatccagagccacaggactccagatgggagcgaagatgga
gactccagccaaagaaagttggagaaagttgatgacagcacttcaagcaataattcccct
gctcattctggggcaagtacacagccaggccaacgaactgtgggctcaccagaatacatg
aagaataacaggagcttcaagagactctggggaaaacttcgaagaacacagtctggaggg
ctccaggcagcagatccagatgccggtcagttcaaaagagggggactgcgtgctacagca
ggacccagactgaccaggacccctgaatcatatgactctgcacgtgatatgaatattcca
ttcagccagtggaccaaggagcaggtgtgtggctggctagaggactatggactaggccag
tacgtcagtctctccagacagtgggttgaaaatggacagacactactgtctgcaacacct
caggactttgagaaggagatgggtatgaagaatccattgcacaggaagaagctgcagctg
gctctgagggcattcaccaccaaagttatagagaaatcatcggagctggaccacatctgg
gtcacccgctggttggatgacattggtttgcctcagtataaagaccagttccatgaggcc
agagttgatggtcgaatgatacaatacctcacagtgaatgacctcttgactctcaaggtc
accagccagcttcatcatctcagcattaaatgtgccatccatgtccttcatgccaacaag
tttaatccccactgtcttcgacgtaggccgggggaagagaaacagcccactccctcagaa
gtggtgcagtggtctaaccatcgcgtgatggagtggctaagagcagtggatctagctgag
tatgctcctaatctacggggcagcggtgttcatggtgggctgattatcttggagcctcgc
ttcagctcagagactttggccctgctgttaaatattcctcctcaaaagactttgctccgt
cgtcacctcgcaactgccttctctgccttggtagggcctcaggccacacaggagaagcga
gagtatggaaacgccacaggccacgttcccttaactaccactgctaaagtgaagccaaag
aagctgggcttcacccaattcagtcacctgagaaagagaaaacctgatgaatctgcggac
tatatctgccctatagacagtggagcactgacaatgaatggggtttcgcgactgccctct
gcagcactcaggggcctcagccccagcttggacagacaggctgagaggagggagcagatt
gggataaaagctgaggctaatggcctcaaacaataa
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