Lates calcarifer (barramundi perch): 108877863
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Entry
108877863 CDS
T04895
Symbol
snai1b
Name
(RefSeq) snail family zinc finger 1b
KO
K05707
snail 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108877863 (snai1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108877863 (snai1b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
108877863 (snai1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2HE
zf-met
Zn_ribbon_8
zf-C2H2_15
Zf-C2H2_ZNF451_6th
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
Zn_ribbon_IS1595
Zf-C2H2_ZNF451_1st
Motif
Other DBs
NCBI-GeneID:
108877863
NCBI-ProteinID:
XP_018523595
UniProt:
A0A4W6F6H5
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Position
LG6:complement(15948476..15950875)
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AA seq
273 aa
AA seq
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MPRSFLVKKYFSIKKPYYRESQLESQTAFVPESLPRAELPTQNNSSALTCYPTNPFFNSM
DTLPAPLSPVTPVSLPPSPLGPLDLSSSPSSSSGSEEEEDGGRSSDPPSPDIIQHVYHCL
HCSKSYSSLSALSHHQMSHHQLPHCAPLQETPSLPAEASARPAFHCKHCPKEYTSLGALK
MHIRSHTLPCVCPTCGKAFSRPWLLRGHIRTHTGERPFACQHCNRAFADRSNLRAHLQTH
SEVKKYQCGSCSRTFSRMSLLHKHNASGCCPAS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtcatttcttgtgaagaaatatttttccatcaagaagccatactacagggag
agccagctggagagtcaaactgcttttgtcccagaaagccttccccgggctgaacttcca
acacagaacaacagctcagccttgacatgctaccccaccaacccattcttcaacagcatg
gacaccctgcccgcgcctctctcccctgtcaccccggtgtctctgcccccctcacccctg
ggtcccctggacctcagcagctccccctccagcagtagcggcagcgaggaagaggaggac
ggggggcgcagctcggatccccccagcccggacatcatccagcacgtctaccactgtctc
cactgcagtaagagctacagcagcctctctgccctgtcccaccatcagatgtcccaccac
cagctcccacactgtgccccgctgcaggagacaccctctcttcccgctgaggcttctgcg
cgcccagccttccactgcaaacactgccccaaggagtacaccagcctcggagccctgaag
atgcacattcgctcacacactctgccctgtgtgtgccccacctgcgggaaggccttctct
aggccgtggctgctcagaggacacattcgcacacacacaggtgaacgcccctttgcttgt
caacactgtaatcgagcttttgccgaccgctccaaccttcgcgcccacctgcagactcac
tccgaggtgaagaagtaccagtgcggctcctgctcgcggaccttcagccgcatgtccctg
ctgcacaaacacaacgcctctggatgctgcccggcctcataa
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