KEGG   Lates calcarifer (barramundi perch): 108877863
Entry
108877863         CDS       T04895                                 
Symbol
snai1b
Name
(RefSeq) snail family zinc finger 1b
  KO
K05707  snail 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    108877863 (snai1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108877863 (snai1b)
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    108877863 (snai1b)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz C2CH-3rd_BIRD-IDD zf-C2H2_6 zf-C2HE zf-met Zn_ribbon_8 zf-C2H2_15 Zf-C2H2_ZNF451_6th zf-C2H2_7th_ZNF462 Zf-C2H2_ZNF451_C Zn_ribbon_IS1595 Zf-C2H2_ZNF451_1st
Other DBs
NCBI-GeneID: 108877863
NCBI-ProteinID: XP_018523595
UniProt: A0A4W6F6H5
LinkDB
Position
LG6:complement(15948476..15950875)
AA seq 273 aa
MPRSFLVKKYFSIKKPYYRESQLESQTAFVPESLPRAELPTQNNSSALTCYPTNPFFNSM
DTLPAPLSPVTPVSLPPSPLGPLDLSSSPSSSSGSEEEEDGGRSSDPPSPDIIQHVYHCL
HCSKSYSSLSALSHHQMSHHQLPHCAPLQETPSLPAEASARPAFHCKHCPKEYTSLGALK
MHIRSHTLPCVCPTCGKAFSRPWLLRGHIRTHTGERPFACQHCNRAFADRSNLRAHLQTH
SEVKKYQCGSCSRTFSRMSLLHKHNASGCCPAS
NT seq 822 nt   +upstreamnt  +downstreamnt
atgcctcggtcatttcttgtgaagaaatatttttccatcaagaagccatactacagggag
agccagctggagagtcaaactgcttttgtcccagaaagccttccccgggctgaacttcca
acacagaacaacagctcagccttgacatgctaccccaccaacccattcttcaacagcatg
gacaccctgcccgcgcctctctcccctgtcaccccggtgtctctgcccccctcacccctg
ggtcccctggacctcagcagctccccctccagcagtagcggcagcgaggaagaggaggac
ggggggcgcagctcggatccccccagcccggacatcatccagcacgtctaccactgtctc
cactgcagtaagagctacagcagcctctctgccctgtcccaccatcagatgtcccaccac
cagctcccacactgtgccccgctgcaggagacaccctctcttcccgctgaggcttctgcg
cgcccagccttccactgcaaacactgccccaaggagtacaccagcctcggagccctgaag
atgcacattcgctcacacactctgccctgtgtgtgccccacctgcgggaaggccttctct
aggccgtggctgctcagaggacacattcgcacacacacaggtgaacgcccctttgcttgt
caacactgtaatcgagcttttgccgaccgctccaaccttcgcgcccacctgcagactcac
tccgaggtgaagaagtaccagtgcggctcctgctcgcggaccttcagccgcatgtccctg
ctgcacaaacacaacgcctctggatgctgcccggcctcataa

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