Lates calcarifer (barramundi perch): 108877873
Help
Entry
108877873 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108877873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108877873
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108877873
Enzymes [BR:
lcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
108877873
Ubiquitin system [BR:
lcf04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
108877873
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108877873
Exosomal proteins of other body fluids (saliva and urine)
108877873
Exosomal proteins of colorectal cancer cells
108877873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
DUF7243
Viral_DNA_Zn_bi
Motif
Other DBs
NCBI-GeneID:
108877873
NCBI-ProteinID:
XP_018523605
UniProt:
A0AAJ7PGH0
LinkDB
All DBs
Position
LG6:15059074..15071977
Genome browser
AA seq
1057 aa
AA seq
DB search
MSSSPLSKKRRLSGTETKTGSHCSSSNSVRTDLSHTPANGMAKNGNDAEIDEGLYSRQLY
VLGHDAMKRMQNSNVLISGMRGLGVEIAKNVILGGVRSVTVHDQGVAEWRDLSSQFYLRE
EDLGKNRAEVSQPRLAELNNYVPVTAYTGALTEDYLTKFQVVVLTNSTLDEQQHVGEFCH
SKGIKLIIADTRGLFGQLFCDFGEEMIVYDTNGEQPLSAMISMITKDNPGVVTCLDEARH
GFESGDYVTFTEVQGMTELNGCQPVEIKVLGPYTFSICDTAGFTDYVRGGIVSQVKMPKK
IAFKSISSSLAEPEFVMTDFAKFDRPGQLHVGFQAIHAFQKKHNHLPVPWNQADGDELLT
LAKEVNSAQTGSAKVEQLDEALMKKMSFVSAGDLAPVNAFIGGLAAQEVMKACTGKFMPI
MQWLYFDALECLAEEEGVLLTEEECAPRNCRYDGQIAVFGTKLQDMLAKQRYFLVGAGAI
GCELLKNFAMIGLASGEGEVIVTDMDTIEKSNLNRQFLFRPSDVTKMKSDTAAAAVKQMN
PSIRITGHQNRVGPDTERIYDDDFFESLDGVANALDNVDARMYMDRRCVYYRKPLLESGT
LGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPP
ENSMQYLTDPKFMERTLKLPGAQPVEVLEAVYKSLVTDCPHSWADCVAWARNHWQCQYSN
NIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLEFSTSNELHMDYIVAAANLFAQTYGLQG
STDRAGIIKILQEVKVPPFTPRSGVKIHVSDQELQNSNSSVDDSRLEELKAQLPSPESSQ
FKLCAIDFEKDDDTNFHMDFIVAASNLRAENYDIPPTDRHKSKLIAGKIIPAIATTTAAV
VGLVCLELIKIVQGHKKLESYKNGFMNLALPFFAFSEPIAAPRHKYYEIDWTLWDRFEVT
GLQPNGEEMTLRQFLDYFKNEHKLEITMLSQGVSMLYSFFMPAAKLKERLDLPMTEIVTK
VSKKKLGKHVKALVFELCCNDLSDEDVEVPYVRYTIR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgtcgcttgtcaggaacagagacgaagacggga
tcccactgctcctcctctaactctgtcagaactgatctgtcccacacacctgccaacggc
atggctaagaatggcaatgatgctgagatcgatgaaggcctgtactccagacaactttat
gtgttgggccatgacgctatgaagcgcatgcagaactccaatgtccttatctctggtatg
agaggtcttggagtggagattgccaagaacgtcatcctagggggagttagaagtgtcact
gtacatgaccaaggagttgcagaatggagggacctctcctctcagttttaccttcgggag
gaggatctggggaagaacagggcagaggtcagtcagccccgtttggctgaactcaataac
tatgttcctgtgactgcctataccggagcactcactgaagactacctgaccaaattccag
gtggtagtgctgacgaactcgactctggacgagcagcagcatgtcggggagttctgccac
agcaaaggaatcaagctgatcattgcagacacacgtggtctgtttggccagcttttctgc
gactttggcgaagagatgattgtgtacgacaccaatggagagcagccactgagtgccatg
atttccatgatcaccaaggacaatccaggggttgtgacatgtctcgatgaggctcgtcat
ggttttgagagcggagactatgtcaccttcacagaagttcagggtatgacagagctcaat
ggctgccagccggtggaaatcaaagttctgggtccctacaccttcagcatctgtgacaca
gctggctttacagactatgtaagaggaggaatcgtctcccaggtcaagatgcccaagaag
atcgcatttaaatccatctcttcctccttggctgagccagaattcgtgatgacagacttt
gccaagtttgatcgtccagggcagctgcatgtgggcttccaggctatccatgccttccag
aagaaacacaaccaccttcctgtaccttggaaccaggctgatggggatgagctgttgaca
ttggccaaggaggtgaactctgcccaaacggggtctgctaaagtggaacagttggatgaa
gctctcatgaagaagatgtcatttgtttctgctggtgatctggcccctgtcaatgctttc
attgggggtctggctgcacaggaagtgatgaaggcatgcacaggaaaatttatgccaata
atgcagtggctatacttcgatgccctggaatgcctggccgaagaggaaggagtcttgctc
acagaggaagagtgtgcccctaggaactgtcgatacgatgggcagattgcagtgtttggc
accaagctgcaggatatgcttgccaaacagcgctacttcctggttggagccggtgccatc
ggctgtgagctgttgaaaaactttgccatgattggactggctagcggagagggcgaggtc
attgtgacagacatggacaccatagagaagtccaacctcaacagacagttcctcttcaga
ccctcggacgttacgaaaatgaagagtgacacagcagcggcagcagtgaagcagatgaac
ccctccatcaggatcacaggtcaccagaacagagtgggtcctgacacggagaggatctat
gacgacgacttctttgagagccttgacggagtggccaatgcactggacaatgttgatgca
cgtatgtacatggatcggaggtgcgtgtactaccgtaaacccttactggagtctggcact
ctgggcaccaaaggcaacgtccaagtcgtgatccccttcctcacagagtcatacagctcc
agccaagacccaccagagaagtccatccccatctgtaccctgaagaatttcccaaatgcc
attgaacacacactgcaatgggcccgtgatgagtttgagggactattcaaacagccacca
gagaactccatgcagtacctcacagatcctaagttcatggagcgtactctgaagcttcct
ggagctcagcccgtggaggtactggaggctgtctacaagagtcttgtcacagactgcccc
cacagctgggctgactgtgtagcctgggcacgcaaccactggcagtgccagtacagcaac
aacatccgtcagctactgcacaacttccccccagatcagctcaccagctctggtgccccc
ttctggtctggcccaaagagatgtcctcaccccctagaattcagcactagcaatgagctg
cacatggattatatagtggcagcagccaacctgtttgctcagacatacggcctgcaaggc
agcactgatcgtgcaggcatcatcaagatcttgcaggaggtcaaggtgccgccctttacc
cctcgttcaggggttaaaatccatgtctctgatcaggagctgcaaaacagcaattcctct
gttgatgactccaggctggaggagctgaaggcccagctgccctccccagagtcttcccag
ttcaaactctgcgccatcgactttgagaaggatgatgacaccaacttccacatggacttc
attgtggcagcatccaacctgagagcagagaactacgacattccccccacagacagacat
aagagcaaactgatagctggcaagatcattcctgccattgccactaccacagctgcagtg
gtgggcctggtgtgcctggagctcatcaagattgtccaaggtcacaagaagctggagtca
tacaagaatggcttcatgaacttggccctgcctttctttgccttctctgaaccaattgct
gctcccagacacaagtactatgaaatcgactggacgctgtgggatcgctttgaggtcaca
ggcttgcagcccaatggggaggagatgacactccgacagttcttggactacttcaaaaat
gagcataagttggaaatcaccatgctttctcagggagtgtccatgctctattccttcttc
atgcctgctgccaaactcaaagagagactggatctgccgatgacggagattgtgactaaa
gtgtccaaaaagaagctgggcaagcatgtcaaagccctcgtgttcgagctatgctgtaac
gacctgtcagacgaagacgtggaagtgccgtatgtcagatacaccatccgctga
DBGET
integrated database retrieval system
