KEGG   Lates calcarifer (barramundi perch): 108877880
Entry
108877880         CDS       T04895                                 
Name
(RefSeq) rho-related GTP-binding protein RhoA-C
  KO
K04513  Ras homolog gene family, member A
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04081  Hormone signaling
lcf04144  Endocytosis
lcf04150  mTOR signaling pathway
lcf04270  Vascular smooth muscle contraction
lcf04310  Wnt signaling pathway
lcf04350  TGF-beta signaling pathway
lcf04510  Focal adhesion
lcf04517  IgSF CAM signaling
lcf04519  Cadherin signaling
lcf04520  Adherens junction
lcf04530  Tight junction
lcf04621  NOD-like receptor signaling pathway
lcf04625  C-type lectin receptor signaling pathway
lcf04810  Regulation of actin cytoskeleton
lcf05100  Bacterial invasion of epithelial cells
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    108877880
   04350 TGF-beta signaling pathway
    108877880
   04150 mTOR signaling pathway
    108877880
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    108877880
   04517 IgSF CAM signaling
    108877880
   04519 Cadherin signaling
    108877880
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108877880
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108877880
   04520 Adherens junction
    108877880
   04530 Tight junction
    108877880
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108877880
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    108877880
   04625 C-type lectin receptor signaling pathway
    108877880
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    108877880
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108877880
   05100 Bacterial invasion of epithelial cells
    108877880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108877880
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108877880
   04031 GTP-binding proteins [BR:lcf04031]
    108877880
Membrane trafficking [BR:lcf04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    108877880
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108877880
  Exosomal proteins of other body fluids (saliva and urine)
   108877880
  Exosomal proteins of colorectal cancer cells
   108877880
  Exosomal proteins of bladder cancer cells
   108877880
GTP-binding proteins [BR:lcf04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    108877880
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB VASP_tetra
Other DBs
NCBI-GeneID: 108877880
NCBI-ProteinID: XP_018523615
UniProt: A0A4W6ER71
LinkDB
Position
LG6:15085522..15089041
AA seq 193 aa
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELAKMKQEPVKSEEGRDMANRIGANNYQECSAKTKDGVREVFEMATRAALQ
AKKRGKKSGCLLL
NT seq 582 nt   +upstreamnt  +downstreamnt
atggcagccatcagaaagaagttggtgatagttggggatggtgcttgtggtaagacctgt
ctgctcatcgtcttcagtaaggaccagttcccagaggtctacgtccccactgtttttgag
aactatgtggcagacattgaagtggatggaaaacaggtagaactagcactttgggataca
gcaggtcaggaagactatgacagactgaggcctctctcctaccccgacactgatgttata
ctcatgtgcttttccgtagacagccctgacagtttagagaatattccagagaagtggact
cctgaagtgaaacacttctgtccaaatgtccccatcatcctggtgggcaataaaaaagat
ctgcgcaatgatgagcacaccagacgagagcttgccaaaatgaaacaggagccagttaaa
agtgaagagggcagagatatggcaaaccgcatcggtgccaacaattaccaggagtgttct
gccaaaaccaaagatggtgtgagggaagtcttcgagatggcaactagggcagcactgcag
gccaagaaacgtggcaagaagtccggttgccttctgttatag

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