Lates calcarifer (barramundi perch): 108877886
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Entry
108877886 CDS
T04895
Symbol
cacna2d3a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108877886 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108877886 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
108877886 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108877886 (cacna2d3a)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108877886 (cacna2d3a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
108877886
NCBI-ProteinID:
XP_018523626
UniProt:
A0A4W6F0K8
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Position
LG6:15186294..15298299
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AA seq
1092 aa
AA seq
DB search
MQVDRSCVVSSAWCACLFLLFSTLSARVTEVGGTHQSIPPSVVKLWASAFGGEMKSISAK
YSGSQLLQKKYKEFERAVRVEEIDGLRLVKRLAEDMEEMFHKKAQAMKRLVEAAEEAHLQ
HEEDPNLQYEYFNAVLINEVDEEGKRVELGGEFILQPNDHFNNLSVNLSLSVVQVPTNMY
NKDSAIVNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAF
DCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNE
ELHYVEPCLNGTLVQADVTNKDHFREHLDKLFAQGIGMLDIALTEAFNLLSDFNETGRGS
ECSQAIMLVTDGAVDTYDAIFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFT
QISTLADVQENVMEYLHVLSRPKVIDREHDTVWTEAYIDSTLPQAQKLEDGQGPVLMTTV
AMPVFSTKNETRNRGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPDL
RPLYGDGKKRRKPNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVKKSVDKGKRVLV
LHNDYYYTDIKGTPFSLGVALSRGHGKFFFRGNVTVEEGLHDLEHPDVALADEWTYCNTD
EHPEHRYLSQIEAIKLYLSGHEPHLQCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENS
DKGVEIAYLGTRTGLSRINLFVVPDELTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPG
TFVYSLPFNTGSENKSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQKKFWTASRQCAA
LDGKCSISCDDENINCYLIDNNGFVLVAEDYTLTGKFFGEAEGAVMSKLLQMGSFKRVTL
YDYQALCWVYSESSDSGHTLLDPYFAFFSAVKWILTELVIFLVEFNLYSWWYSDLTAKAQ
RIGRTMQVPCDTEYPAFVSERTIKENTGNIDCDGCIKSFVIQQIPSSNLFMVVVDNKCDC
SMFEPITMDPVEIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGGAAGLTPSLVA
TLLCVLLALFPR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggatcggagctgtgtggtttccagtgcgtggtgtgcgtgtctgtttttactt
ttctcaactctaagcgccagggtcaccgaggtgggaggcacccaccaaagcatccctcca
tccgtggtgaagctgtgggcttcagcttttggtggggagatgaagtccatctcggcaaag
tactctggctcccagctgctgcagaagaaatacaaggagtttgagcgggcagtgcgtgtg
gaggagattgatgggctgcgactggtaaagaggctggcggaggacatggaggagatgttt
cacaagaaagcccaggcaatgaagagactggtggaggcagcagaggaagcacacctacag
cacgaggaggatccaaatctacagtatgaatacttcaatgcagtgctgatcaatgaggtg
gatgaagaggggaaaagagtagagctcggaggagaattcatcctgcagcccaatgaccat
tttaacaacctgtcagtcaacctcagcctcagtgtggtccaggtacccaccaacatgtac
aacaaagactctgcaattgtcaacggagtgtactggtctgaggccttgaataaagtgttt
gtggataacttcgagagagacccatcactcatatggcagtactttggcagcgccaaaggc
tttttcaggcaatacccaggaatcaaatggaagccagatgagcacggggtcatagctttt
gactgtcgtaaccggaagtggtacatccaggctgccacctctccgaaagatgtggtgatc
ctggtggatgtcagtggcagcatgaaaggcctcaggctgaccatcgccagacagaccgtt
tcctccatcctggacactcttggagacgatgactttttcaacataatcgcttacaatgaa
gagttgcattatgtggagccgtgcctgaatggaactctggtccaagcagacgtcaccaac
aaagatcatttccgggagcaccttgacaagctgtttgctcaaggcattggtatgttggac
atagctttgactgaagccttcaatctcctcagtgacttcaacgagactgggagggggagc
gagtgtagccaagccattatgttggtgacagatggggccgtggacacatatgatgctatc
tttgccaagtataactggccagagaggaaggtccgcatattcccttacctgattggtcga
gagtcggccttcgcagataatctgaaatggatggcatgtgctaacaaaggctacttcact
cagatttccacgttggcagacgtgcaagagaatgtgatggagtatctccacgtgctgagt
cgtcctaaggtgatcgaccgggagcacgacacggtgtggacggaggcctacattgatagc
actctcccccaagcacaaaagttggaggatggtcaaggtccagttctgatgaccacagtg
gcaatgccagtgttcagtaccaagaatgagactagaaaccgtggcatccttctaggggtg
gttgggacagacgtgcccgtctctgagctgctcaagaccatccccaaatataagctgggc
attcatggctacgcctttgcaatcaccaacaacggctacatccttacacacccagatctg
cgtccactttatggggatggcaagaagcgaaggaagccgaactacagcagtgtggatctg
tctgaggtggaatgggaggataaggacgacacgctgcgaaatgccatggtcaacaggaag
acagggaccttctccatggaggtgaagaagagtgtcgacaaagggaaacgtgtactggtg
ttgcataatgattactactacacagacatcaaggggactcctttcagtctaggggtagct
ctttccagaggccacgggaagtttttcttcagagggaatgtcacagtggaggaaggactt
catgacttggagcatcctgatgttgcactggcagacgagtggacatactgcaacacagat
gagcacccagagcaccgctacctatcccagatagaggcgatcaaactctacctcagtggc
catgaacctcacctacagtgtgacaaggagctgattcaggaggtcctcttcgatgcggtc
gtgactgcccctttggaggcttactggaccagcctcgtgctcaataagtctgagaactca
gacaaaggagtggagattgcctacctgggtacaagaacaggcttatccagaattaacctg
tttgtggtgcctgacgagcttacaaaccaagacttcctgacagctgaagacaaagagggg
gtgttcaacgccgatcactttccgctgtggtataagagagcggcagaacaagttcctggt
acctttgtctactctctacctttcaacacaggatcagaaaacaagagcgttgtattggcc
agcactgccattcagcttctggatgagaggaaatcacccatagctgcggctgtgggcatc
cagatgaaactggagttctttcagaagaaattctggacagccagcagacagtgcgcagca
ttagatgggaaatgctccataagctgtgatgatgagaatattaactgctacctcattgac
aacaatggcttcgttctggtagcagaggactatactctgacagggaaattttttggagaa
gcagagggagctgtaatgagtaagcttctgcagatgggctctttcaagagggtcactctg
tatgactaccaggctctttgttgggtctattcagagagcagtgacagtggacacacactg
ctggatccttactttgctttcttctcagccgtgaagtggatcctgaccgagcttgtcata
ttcctggtcgagttcaacttgtacagctggtggtactctgacctcacagctaaagctcag
aggataggtcggaccatgcaggtgccatgtgacacggagtatccagcctttgtgtccgag
agaaccatcaaagagaacacgggcaacattgactgcgatggctgcatcaagtcctttgtg
atccagcagatccccagcagtaatctcttcatggtggtggtggacaacaagtgcgactgc
agcatgttcgagccaatcaccatggaccccgtcgaaatcatgtataatgaatctcttaag
tgcgagaggttgaagatgcaaaaggacaggaggcgcccagatacctgtcacccttttcac
cctgaggagaactcaatggagtgcggaggagccgctggcctcaccccgtctcttgtggcg
acactgctctgcgtcctcctggcgctgttccctaggtga
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