Lates calcarifer (barramundi perch): 108877899
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Entry
108877899 CDS
T04895
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108877899 (dhx35)
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108877899 (dhx35)
Spliceosome [BR:
lcf03041
]
Complex C
Other components
Complex C specific factors
108877899 (dhx35)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
nSTAND3
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
108877899
NCBI-ProteinID:
XP_018523643
UniProt:
A0A4W6F6J9
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Position
LG6:16069762..16077707
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AA seq
699 aa
AA seq
DB search
MAAPLSTMKFWKPGAEAPGISEERELNTETTGSPIIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFHDFFNLNETGDPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSFLQDQARSLS
RYGMKKHLRILPMYSGLPYAEQMKVFERAPSSVRKIVVATNIAETSITINGIVFVIDCAF
VKLRAYNPCTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPTGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVLPNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVSGFFANAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTS
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctctccacgatgaaattttggaagccgggggctgaggcaccggggatc
tcagaggagcgggagctcaacacggagaccaccggctcccccatcatcttcaacccgcac
accgccctctccatagagaaacagcggcagaaactccctgttttcaagcacagaaacaac
atcttgtacttggtggagagctaccagactgtcatcatagttggtgagacgggatgtggg
aagacaacacaaatacctcagtacctgctggaggctggctgggcagcggaggggaaggtg
attggagtgacacagccccgccgcgtggctgctatctctgttgctaaccgtgttgcagag
gagcggggggccctgctgggacatgaggtgggctacaccatccgatttgacgactgctct
gatccccatgccacgaggatcaagttccttacagatggcatgctggtgcgggaaatgatg
gctgatcctctattgaaaaaatacagtgtgttgatgctagatgaagcacatgagagaacc
ctgtacacagacatagccattggtctactaaagaagatacagaagaagcgacgagacctg
cgactgattgtggcctctgccactctggatgccaagaaattccatgacttcttcaacctg
aatgagactggggatcctaacaaggacacatgtggtattctgacagtggaaggacgcacc
tttccagtggatgtcttctatactgtcagccctgttccagactatgtgaaggccacagtg
gagacggtgctgaagatccatgagacagaggatgatggagatgtcctggcttttcttact
ggacaggaggaggtggagaaggtggtgtcctttcttcaggaccaggcgaggtctctgtca
cgatatggtatgaagaaacacctgagaattttgcccatgtattctggcctaccatatgct
gagcagatgaaggtctttgagagggcgccgtcctctgttcgtaagattgtggtggctacg
aacatagctgagacctccatcaccataaatggaattgtattcgtcatcgactgcgcattt
gtgaagctccgagcatataatccctgcactgccattgagtcactggtggtcacccccatt
tccaaagcttcggccagtcagagggccgggagagccggacgaaaccggcctgggaaatgc
tttagactttacacagaggaggactttgagaaactgcctgcctctactgtgccagagatg
cagcgcaccaatttggcccctgtcatcctgcagctcaaagcgttaggcattgacaacgtg
ctgcggttcagcttcctttctcctcctccagcccagaccatggttcaagctctggaactg
ctttacgctctgggaggtcttgaccattacggccgtttgactgatcccacgggtgtgcgg
atggcagagtttcctctcagccccatgtttgccaagatgctgctagagtcgggaaatttt
ggctgctccaaagagattgttaccatagcagcaatgatgcagattcagaatatatttgtt
gtgctgcccaatcagaagaaagctgctgcccgagagcacaggaaatttgcagttgctgag
ggagaccacctcaccatgctgaatgtgtatgaagcgttcattaagcaccagaagagctcc
cagtggtgtcaggaacattttctcaattacaagggtctgctgagggctgtgactgtacga
gagcagctccgacgtctcatgaacaagtttaaggtgccacggacgtccagcgaaggtgat
cctgatgtgatcctgaagtgtattgtctctggattttttgctaatgcagcccgcattcac
cattctggttcctacaggactttacgcgatgatcgtgagcttcacatccaccccaactct
gtgctttttggagagaagcctccaaaatgggttgtcttcaatgaagtggtgcagacatca
aaatactacatgcgtgatgtgactgctgttgagtcgtcctggttggttgagctggctcct
cacttttacaagcaggctaagcatggttcactggccagcaagagatcccgggtcctctaa
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