Lates calcarifer (barramundi perch): 108877924
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Entry
108877924 CDS
T04895
Name
(RefSeq) parapinopsin a
KO
K04251
long/medium wavelength-sensitive opsin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108877924
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Vision
Opsin
108877924
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108877924
NCBI-ProteinID:
XP_050927242
UniProt:
A0A4W6F5X5
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Position
LG6:15730310..15733467
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AA seq
347 aa
AA seq
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MEPVALKGNSSSSHSSVNAELLSRTGYTTLAVIMGVFSAAGIILNVLVIMVTVRHRQLRQ
PLSYALVNLAVCDLGCALLGGVPTTVTSAMGYFSLGRVGCVLEGFAVSFFGIASLCTIGV
ISVERYIVVCYPMGAVLFQTRHAVAGVVLSWVWSFVWNTPPLFGWGSYELEGVKTSCAPN
WYNRDPGNMSYIIIYFFLCFAVPFSIIMASYSRLLWTLRQVTKLQVSEACSTNRVEVQVA
RMVVVMVLAFLITWLPYAAMALAVIIDSSLYIDPVIATIPVYLAKSSTVYNPIIYVFMNR
QFRGYAVPTVLCGWNPWASDPQMSEGETTVATLSKSQRVSPKQSLKE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgtcgccctcaaaggaaactcctcatcatctcacagctcagtcaacgcagag
ctcctgtctcggaccggctacacaacattggccgttatcatgggtgtgttttctgcggcg
gggatcatccttaatgtcctggtgattatggtgacagtgaggcacagacagctaaggcag
ccgctcagctacgccctggttaacctggccgtatgtgacctgggctgtgctttgttggga
ggtgtgcctaccacagtgaccagtgccatgggatacttcagcctgggacgtgtgggctgt
gtgttagagggctttgcagtttccttttttggtatagcaagtctgtgtacaataggagtc
atttctgttgaacgctacatagtggtgtgttatcccatgggcgctgtcttgttccagacc
agacatgcagttgctggagtggtgctgtcctgggtgtggtcatttgtgtggaacactcca
cctctgtttggttggggaagttatgagctggagggggtgaagacttcctgtgcccctaac
tggtataaccgggatcctgggaacatgtcctacatcatcatatacttcttcctctgcttt
gctgtgcccttctccatcatcatggcgtcctactcacgactcttgtggacccttcgtcag
gtgaccaaactgcaagtatctgaggcctgcagcacaaatcgtgtggaggtgcaggtggca
cgtatggtcgtggtgatggtgttggccttcctcatcacctggctgccatatgctgccatg
gcccttgctgtcatcatagactccagtctatatattgaccccgttattgctaccatacct
gtttatttggcaaaaagcagcactgtctacaaccccatcatatatgtttttatgaacaga
cagtttcgaggatatgctgttcctactgtcttgtgcggatggaacccgtgggcttcagac
ccacaaatgtctgagggtgagaccactgttgccactctcagcaagagccaaagagtctca
cctaaacaatctttaaaagaataa
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