Lates calcarifer (barramundi perch): 108877950
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Entry
108877950 CDS
T04895
Symbol
top1b
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108877950 (top1b)
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108877950 (top1b)
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Topoisomerases
108877950 (top1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
108877950
NCBI-ProteinID:
XP_018523731
UniProt:
A0A4W6F5H7
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Position
LG6:16001435..16014411
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AA seq
768 aa
AA seq
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MSGDHGHGGSQVNSGSKGSDSHKHKDKHKDKEHRHKDHKKDKEREKFKHSNSEHKEHSEK
KHRDKEKLRHSDGSSDKHREKHKEKDKDKERRREEKIKSSDVDKPKKEKENGYVRDMSPA
AIKSEPEEDNGFYPSPHHKNSKREYDDEEFEFKPKKVKTEHDKKAKKRKHEYEEDEEDED
IKPKKKTKDKKVTEGKKAKKEEEEKWKWWEEERYTDGSKWRFLEHKGPVFAPPYEPLPGN
VKFYYDGKPMKLSALAEEVATFFAKMLDHEYTTKDIFRKNFFKDWRKEMTSEEKSKITDL
NKCNFSEMNEYFKAQSEARKQMSKEEKQKIKEENERLLQEYGFCIMDNHKERIGNFRIEP
PGLFRGRGDHPKMGMLKRRIRPEDIIINCSKDSKHPKPPPGTKWKEVRHDNKVTWLASWT
ENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDRIRNQYRDDWKSKEMRIRQRAV
ALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLYPKMDDQEYVVEFDFLGKDSIRY
YNKIPVEKRVFKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASIT
LQQQLKELTCPDDSIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDEKQNQ
LSAARKQLKAAKADHKASHDEKSKKAVEVKRKAVQRIEEQLMKLQVQATDREENKQIALG
TSKLNYLDPRISVAWCKKYGIPIEKIYNKTQREKFAWAIDMAEKDYEF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagatcatggacatggaggctctcaggtcaattctggatctaaaggaagcgac
tctcacaaacataaagacaagcacaaagacaaggaacacagacacaaagatcacaagaaa
gacaaggagcgagagaaattcaagcacagcaacagcgaacataaggagcactctgagaag
aaacacagagacaaagagaagctgaggcacagcgacggcagctcagacaagcacagggaa
aaacataaagagaaagacaaggacaaagagaggaggagagaagagaagatcaaatcatct
gatgtagacaagcctaaaaaggagaaagaaaatggatatgtaagagacatgagcccagct
gccattaagagtgagccggaggaagacaacggcttctacccatctccccatcacaagaac
tccaagcgagagtacgatgatgaagaatttgaattcaagcccaaaaaagtgaagacagaa
catgacaaaaaggcaaagaagaggaaacatgagtatgaagaagatgaggaggatgaggac
atcaagcccaaaaagaagacaaaagacaaaaaggtaacagaaggaaagaaagccaaaaaa
gaagaagaggagaagtggaaatggtgggaggaggagagatatactgatggctccaaatgg
cgcttccttgaacataaaggtccagtgtttgcacctccctacgaacccctgcctggcaac
gtcaaattttactatgatggtaagcccatgaaacttagtgctcttgcagaggaggtagca
acattttttgctaagatgttggaccacgagtacaccactaaggacatcttcaggaagaac
ttctttaaggactggaggaaggaaatgacatcagaggagaagtcaaagatcaccgacctg
aacaagtgcaacttcagtgagatgaatgagtacttcaaggcccaatcagaggctaggaaa
cagatgtccaaagaggagaaacagaaaatcaaagaggagaatgagaggctcctccaggag
tacggcttctgcatcatggacaaccacaaggagaggattggaaacttccgcattgagccg
ccgggcctcttccgaggacgaggtgaccatccgaagatgggcatgctgaagcgccgcatc
agacctgaagatatcattattaactgtagcaaggactccaagcaccctaaacctccccca
gggacaaaatggaaggaggttcgtcatgataacaaggtgacctggctggcgtcttggact
gagaacatccagggctccatcaagtacatcatgttgaatcctagctccaggatcaagggg
gagaaggactggcagaaatatgagaccgcccgacggttgaagaagtgtgtggatcgcatc
cgaaaccaatatagagacgactggaaatcaaaagagatgaggatcaggcagagagcagtg
gcactgtatttcatagacaagctggcgctgagggcgggtaacgaaaaggaggaaggtgag
acagcagacacggttggctgttgctcactgcgggtggagcacatcaaactgtatcccaag
atggacgaccaggagtacgtggtggagtttgatttcttgggaaaagactccatccgctac
tacaacaagatccctgtggagaaaagggttttcaaaaaccttcagttgtttctggagaac
aagcagccagaagacgacctctttgaccgactgaatacttccattctgaataaacactta
caggagctgatggatggactgacagccaaggtctttcgtacctacaacgcctccatcacc
ctgcaacagcagcttaaggaacttacctgccctgatgacagcatcccagctaagatcctg
tcatacaaccgtgccaaccgggcagtggcaatcctctgtaaccaccagagagctccgccc
aaaacatttgagaagtccatgcaaaaccttcagaccaagattgacgagaaacaaaatcaa
ctgtctgcagccaggaagcagctgaaggccgccaaggctgatcacaaggcttcccatgat
gagaagagcaaaaaggctgtggaggtgaagcgcaaagctgtccagaggatagaggagcag
ctgatgaagctccaggtgcaggccacagacagagaggagaacaagcagattgctctgggc
acctccaagctcaactacctggatccacgcatctctgttgcatggtgcaagaaatatggc
attcccatcgagaagatctacaacaaaacccagagagagaagtttgcctgggccatcgac
atggctgagaaggactacgagttttaa
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