Lates calcarifer (barramundi perch): 108877983
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Entry
108877983 CDS
T04895
Name
(RefSeq) cell adhesion molecule 1b isoform X3
KO
K06781
cell adhesion molecule 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108877983
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108877983
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Nectin family
108877983
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
C2-set_3
Syndecan
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
108877983
NCBI-ProteinID:
XP_018523770
UniProt:
A0A4W6G271
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Position
LG21:complement(15273459..15405989)
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AA seq
420 aa
AA seq
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MAITGSGSLAISLSVFVISAAFLHKGAAETVTVEGQNLATDNVSVIEGETATISCRVKNN
DDSVIQLLNPNRQTIYFKDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGSPIIESREDVVSEGNETELTCTAIGSKPAASVRWMKGEEELTGE
TTVEETYDRMFTVTSRVKFSVTKEDDGVPVDCIIDHPAVKDLLAQRHLEVLYKPEVKIVV
TYPEGLTREGDNLDLTCIAEGKPHPHQINWLRVDEDVPPHAVVTGSDLYIENLNKSYNGT
YRCVASNAVGEAYDDYILYVYDAPTTIPTPTTNPVNTQDSRAGEGAPQKIDHAVIGGVVA
VVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTDEKKEYYI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacggggagcggatctctcgctatttctctctctgttttcgtgatttcagcc
gcgtttcttcacaaaggagctgctgaaaccgtgacagtcgaaggtcagaacctggcaact
gacaatgtgtcggtgattgagggggaaacggccaccatcagctgcagagtgaagaacaac
gacgactccgtcatccagctgctcaaccccaacagacagaccatctacttcaaagatgtt
agacctctgaaggacagccggttccagctggtgaatttctctgacaacgaactgcgggtg
tctctgtccaatgtgtcactctccgatgagggacgctatgtgtgccagctctacacagat
cctcctcaggaagcctacgcagacatcactgtcctggtcccaccaggcagcccaatcatt
gagagccgcgaggatgtggtcagcgaggggaatgagacggagctcacctgcacagccata
ggcagcaagccagctgcctccgtcagatggatgaaaggagaggaagaactgacaggtgag
acaacagttgaggagacgtatgacaggatgtttactgtcaccagccgggtaaaattttct
gtcaccaaagaggatgatggagtgccagtggactgcatcattgaccacccagctgtaaag
gaccttctggctcaaagacacttggaagtgctatataaaccagaagtgaagattgtggtg
acatatcctgaaggtttaaccagagagggtgacaatctagatttgacgtgcattgcagaa
ggaaaacctcatccccatcagatcaactggctgagagtagacgaggatgtgccgcctcac
gctgtggtcactggctctgatctctacattgagaacctcaacaagtcctacaacggcacc
taccgctgcgtggcgtccaatgctgtgggagaggcctacgatgactacatcctttatgta
tatgatgctcccactactatccccacacccaccaccaacccagtcaacacgcaagactcc
agagccggcgagggggcaccgcaaaaaattgaccatgctgtcataggaggagtggttgcc
gtggtgatgtttgccatcctctgtgcactcattgttcttggtcgatacttcgccagacac
aaaggaacttacttcacacatgaagccaaaggtgcggatgatgcagccgacgcagacacg
gccatcatcaatgcggaggggggacacaacaacacagacgagaagaaggagtactatatc
taa
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