Lates calcarifer (barramundi perch): 108877989
Help
Entry
108877989 CDS
T04895
Symbol
vsig8b
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8b
KO
K06788
coxsackievirus and adenovirus receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03267
Virion - Adenovirus
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
108877989 (vsig8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108877989 (vsig8b)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
CTX family
108877989 (vsig8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
I-set
Ig_2
Ig_C17orf99
DUF4719
TM_ErbB1
Tmemb_9
Tweety
WBP-1
ETRAMP
Adeno_E3_CR2
TMEM154
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
108877989
NCBI-ProteinID:
XP_018523779
UniProt:
A0A4W6F4X1
LinkDB
All DBs
Position
LG13:complement(17309780..17314543)
Genome browser
AA seq
367 aa
AA seq
DB search
MEFVFTSVRLKVVVLILVTIQLQTDVTQAMEITSSGPQTIQKPQYDTVNLGCTFTPGPQD
TGELDIEWSNVSPDMTQKDKLILSYSGGQTHHYGDPSFTRRVSFIGDPKQGDASIAVSNV
RPSDTATYQCKVKKTPGVDTRKVTLVVMVPPSVPKCWVEDGEEKGGTVSLRCKSSQGSTP
LTYVWRRESGGPMPPTATQDPQSGELLIRNHTDSNTGSYVCEVKNAVGSAQCKYALRAYN
PTNKVGVIVGAVIGALLLFLLLLLLIWLLICCCHKRRYEKEVANEIREDAPAPESRPSSR
NSSFRSVLGYRTHPGVHYSSAGNHLPSINESGNGVIYTDGSNGMSPPTSPGGKLAHLQYD
HKYGYPV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtattcacaagtgtgaggctaaaggtggtcgtgctgattctggtaacaatt
cagctgcagacagatgtgacacaggcgatggagataacatcctcggggccacagaccatt
caaaaaccccagtatgacacagtcaacctgggatgcaccttcacccctggcccccaagac
acaggagagctggacattgagtggtccaacgtcagtccagacatgacgcagaaagacaaa
ctgatcttatcatattcaggaggccagacacaccactatggcgaccccagcttcacccgg
agggtcagcttcatcggggaccccaagcagggagacgcttccatcgctgtctcaaatgtg
aggccctcagacacagccacttaccagtgcaaggtcaagaagacgccgggcgtcgacaca
cggaaagtcactctggtggtgatggttccgccatcggtgccaaagtgttgggttgaagat
ggcgaggagaaaggtggcacagtctccctccgctgcaaatcctctcagggatccactcct
ctcacttatgtgtggaggagagagagcggaggtccgatgccacccactgcaacccaggac
ccacagtctggggagcttttgataaggaaccatacagacagcaacactgggagttatgtg
tgtgaggtgaaaaatgctgttggcagtgcacagtgcaaatatgcactgcgtgcatataac
ccaaccaacaaggtgggtgtcatagttggagcggtgattggtgctctcttgctgtttctc
ctcctcctgcttctcatctggctcctgatctgctgctgccataagcgtcgctatgagaaa
gaggtcgcaaatgaaataagggaggacgccccggccccagagagccgaccctccagcaga
aactccagcttccgctcagtgttggggtaccgcacccaccccggggtgcactacagctct
gctgggaaccacctgcccagtatcaatgaatctggaaacggtgtcatctacacagacggg
agtaatgggatgtcaccgccaacttctccagggggcaaacttgctcatctccaatatgac
cataaatacggataccctgtgtaa
DBGET
integrated database retrieval system
