Lates calcarifer (barramundi perch): 108878004
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Entry
108878004 CDS
T04895
Name
(RefSeq) T-box transcription factor TBX5b
KO
K10179
T-box protein 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108878004
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Other transcription factors
T-box
108878004
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Motif
Pfam:
T-box
Motif
Other DBs
NCBI-GeneID:
108878004
NCBI-ProteinID:
XP_018523803
UniProt:
A0A4W6GAA3
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Position
LG13:complement(11038163..11050726)
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AA seq
530 aa
AA seq
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MANGGDQFGLAERPDSDCMDSPKETKQENPSFTLNSPTSPQTASSQQGMEGIKVFLHDRE
LWTKFDEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILLMDIVPGDDHRYKFADNKWS
ITGKAEPAMPGRLYVHPDSPATGAHWSRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPR
LHIVKADENNGFGSKNTAFCTHVFSETAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDN
ELHRMAKLQGKDYPVVPRSTVRQRACSAGSPFSGEGRGLRGSPEAVASPYSCENGLSCSS
PQELLNAPPAHPYTLPHPHLQHGQQTQVYHCTKRKVEENCPSGNRQHPYKKPFTGSSPSE
GESYYHPSSYPPPPPGLANNPALGLTDSPYSSDMGQRQACMFAGSEPRLDELSCASWSYT
CPLPSAMTPMEPYPPYTPHPPYSSSPQGSRLSAIAHQSSPPLGEHIAHDPYQSQSSGPPS
QSSQNIHSRQLSPPLREYPRYTPNLSPPLYHTLETHTHIRCGVPEWSAAS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacggaggggatcagttcggccttgcagagcgtccggactcggactgcatggat
tccccaaaagaaaccaaacaggaaaatcccagcttcaccttaaactcaccaacttcaccg
cagactgcgtccagtcagcaggggatggagggaatcaaagttttccttcatgacagggaa
ctctggaccaagtttgatgaagtgggaactgaaatgatcatcactaaagctggaaggagg
atgttccctagttacaaggtgaaggtcacaggcctcaacccaaaaaccaagtacatactc
ctcatggacattgtccccggggatgaccatcgctacaaattcgcagacaacaaatggtcg
ataacgggaaaggcagagcccgcgatgccggggaggctctacgtgcacccggactctccc
gccaccggagcccactggagccgccagctcgtctcttttcagaagctcaaactcaccaac
aaccacctggacccctttggacacataatactcaactccatgcacaaataccagcctcgt
ctgcacatcgtgaaggcggacgagaacaacggcttcggctcgaagaacacagcgttctgc
acccacgtcttctctgagaccgccttcatcgccgtgacgtcctaccagaaccacaagatt
acgcagctgaagatagagaataatccttttgcgaagggcttcagaggcagtgatgacaac
gagctgcaccgcatggccaagctacaaggcaaggactacccggtggtcccccgcagtact
gtccgtcagagagcctgctccgccgggagtcccttcagtggagagggtcggggtctgagg
ggctctcctgaggccgtcgcgtccccctacagctgtgagaatggcctgagctgcagcagc
ccccaggaactgctgaatgctccccccgcgcacccctacaccctgccccatcctcacctg
cagcacggccagcagacgcaggtctaccactgcaccaagaggaaagtggaggagaactgc
ccgtcaggaaaccgccaacacccgtacaagaaacccttcactggtagctcaccaagtgag
ggcgagtcttactaccacccctcctcctaccctcctcctccccccggtctagccaacaac
cctgccctgggtctcactgactccccctacagctcagacatgggacagcgtcaggcgtgc
atgtttgccggctcagagcccagactggatgaactcagctgtgcatcctggtcgtacacc
tgtccactcccctctgccatgacccccatggaaccctacccgccttacaccccccatcct
ccctatagctccagccctcagggctctcgactcagcgccatagcccaccagagctctccg
ccgctgggggagcacatcgcccatgacccctatcagagccagagctccggacctccgtct
cagagctcccaaaacattcacagcaggcagctcagccctcctctcagagagtatcctcgc
tacacgcccaacctgtctcctcctttataccacacactagagacacacacacacatcagg
tgcggagtaccagagtggagtgcagcctcctaa
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