Lates calcarifer (barramundi perch): 108878026
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Entry
108878026 CDS
T04895
Symbol
gcnt4a
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
KO
K09663
beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00512
Mucin type O-glycan biosynthesis
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
108878026 (gcnt4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108878026 (gcnt4a)
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108878026 (gcnt4a)
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Paralog
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GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
108878026
NCBI-ProteinID:
XP_018523838
UniProt:
A0A4W6FLF4
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Position
LG13:complement(23048740..23050029)
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AA seq
429 aa
AA seq
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MKVRCAHYIHRLRHRCFLFSLSLLVVCLLKLVYIKVTVRDSVYIEPYGITVSISGIHNHR
YDINCTAIYELDPVEIGKALEIKQKITVDVDDYSTVSLTSDCQTFIKTRAYNEVPVSGAE
RSFPLAYSLVVHKNAPMVERILHAIYAPHNIYCIHYDQKSSPAFIKAIKNLAHCIPNVFI
ASKLESVEYAHISRLNADLNCLSDLLRSEVKWKYVINLCGQDFPLKSNYELVMELKQLNG
SNMLESSRPSELKKQRFCFRHELKNVPYEYRRIPVKTTVAKDVPPHGIEMFIGSAYFVLS
WDFVNYISSSQVAKDFLAWSADTYSPDEHFWATLVRIPGVPGHIARSEADITDLRSKTRL
VKWNYLEGNLYPACTGTHMRSVCIYGAAELRWLLNYGHWFANKFDPKVDPILIKCLEEKL
MEKHQYMST
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaagatgtgctcactacatacatagattgagacacaggtgcttcctgttctct
ctgtctctgctggtggtctgtctgctcaagctggtctacattaaagtgaccgtgagggac
agtgtctacattgaaccctatggtatcactgtcagcatatccggaatccacaaccacaga
tatgacatcaactgcactgccatttacgagcttgaccctgtggagataggcaaagctctc
gagataaagcagaaaatcaccgttgatgtggatgattatagcactgtgagtttgacctca
gactgtcaaacatttattaaaacaagggcatacaatgaggttccagtgtcgggtgcagag
cggagcttccccttggcttactctctggtggtgcataagaatgcacccatggtggagcgt
attcttcatgccatctatgcccctcataatatctattgcattcactatgatcagaagtcc
tctccagcgtttataaaggccattaaaaacctggcccactgtattccaaatgtgttcatt
gcctcaaaattggaatctgtggaatatgcccacatcagcaggcttaatgccgacctcaac
tgcctctctgacctgctaaggtcagaggtcaagtggaagtatgttatcaatttgtgtggc
caggattttcctctcaagtcaaactatgaactggtaatggagctgaagcaactgaatggc
agtaacatgctggagtccagccgtcccagtgaactcaagaaacagcgcttctgcttccgg
catgagctgaaaaatgtgccttatgagtatcgtcgtatccctgtcaaaaccaccgtggcc
aaagatgttcctcctcatggtatcgagatgttcatcggaagtgcatattttgtcctgtca
tgggattttgtgaattacattagcagcagccaggtggcaaaggactttctggcatggtct
gctgacacatactcaccagatgaacacttctgggccacccttgtcaggattcctggggtt
ccaggacacattgccaggtcagaagcagacattacagatctgaggagtaagacacgacta
gtcaaatggaactatttagaaggaaatctttacccagcctgcacaggtactcatatgcgg
agtgtttgcatctacggagctgctgaacttcgctggcttcttaactatggccactggttt
gctaacaaatttgaccccaaagtggacccgatcctgattaagtgtttggaggaaaagctg
atggaaaaacaccagtacatgtcaacatga
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