Lates calcarifer (barramundi perch): 108878042
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Entry
108878042 CDS
T04895
Name
(RefSeq) jmjC domain-containing protein 8
KO
K25792
jumonji domain-containing protein 8
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108878042
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
108878042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_8
JmjC_2
JmjC
Cupin_2
Cupin_1
Herpes_ORF11
Motif
Other DBs
NCBI-GeneID:
108878042
NCBI-ProteinID:
XP_018523857
UniProt:
A0AAJ7LJP0
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Position
LG11:989820..993379
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AA seq
272 aa
AA seq
DB search
MEQNQLILKTVTRFVLICFCAVLRAEERADDGGGWFLNSDFRLEDEGPCNIDVLDSSSLS
YQQFIERYAYSRPVILRGLTDNTKFRSLCSKSSLLRDYGERRVRLSTANTYSYRKVDVPF
QEYVDILLRPQSTDALGSETLYFFGDNNFTEWQSLFEHYESPPYVLPHTSGAYSFGIAGP
GTGVPFHWHGPGYSEIIYGRKRWFLYPPDKEPHFHPNYTTLSWVSDTYPHLPEDEAPLEC
TIRPGEVLYFPDRWWHATLNLDTSVFISTFLG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaatcagttgattttaaaaacagtaactcggtttgttctgatatgtttctgc
gccgtgttgagggcagaggagcgggcagatgacggaggaggatggttcttaaattcagat
ttcagattagaggatgaaggtccctgtaacatcgatgtgttggacagctcctcactgtct
tatcagcagttcattgaaagatatgcatacagcagaccagtcatcctccgaggcctgacc
gacaacacaaaattcaggtcgttgtgttccaagtccagtttactccgagactatggcgag
cggagagtgcggctcagcacagctaacacttactcttacaggaaagtggacgtccccttc
caggagtacgtggacattctcctgaggcctcagtcgactgacgccctcggcagcgagacg
ctgtattttttcggagacaacaacttcaccgagtggcagagtctgttcgagcactacgag
tctcctccgtacgtcctgcctcacaccagcggagcgtacagcttcgggatcgcaggtcca
ggaacaggagtccccttccactggcatggtcctggttactctgagatcatctacggaaga
aagcgttggttcctctacccgcctgataaggagcctcacttccacccgaactacaccacc
ctgtcctgggtgtcagacacgtacccccacctgcccgaagacgaggctccgctggagtgc
accatcagacctggagaggttctgtatttccccgaccgatggtggcacgcgactctcaac
ctggacaccagcgttttcatctccaccttcctcggctga
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