Lates calcarifer (barramundi perch): 108878075
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Entry
108878075 CDS
T04895
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108878075
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108878075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108878075
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108878075
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
108878075
NCBI-ProteinID:
XP_018523892
UniProt:
A0A4W6GBB0
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Position
LG13:complement(10059781..10062045)
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AA seq
414 aa
AA seq
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MEARVLTVFCTLLLSSFGIALSTQGHRYHARLNVSLAFRNLSGTHRSRYPLYMMQLYRSF
RTVESSPSVAVNTITTRGDNPSAHSSDSVLSLMAKGCHQVGERWTVTFDMSAISTSELVQ
LAELRIGLPAFSASEHATVDLYHSRKQGCDLGSTSCQDEHLFLGSFGTSPSSSTKSSWKV
FNVTALLKYWLYQGDRVSSQEASGESETDHGSGAGEEGEISSKNLGLRQRKIHHPTTNRV
MMVIFSKHNLPQEGQAAYSLIHTVENSKYVTMDRVSSDSQSRRHKRNRMERMRVAAGAAP
TAAPAAEPVQRPLCRRVDMWVDFDHIGWDEWIVHPKRYNAYRCEGECPTPLDESFHPTNH
AYMQSLLRHHQPERVTCPSCVPTRLSPLSMLYYENDDLALRHHEDMIVEECGCH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaagctagagtgttgacagtgttctgcacactcctcctcagctcttttggaattgct
ctctccactcaggggcacagataccatgcacgcctcaacgtgagtttagcattcagaaat
ctctcaggtactcatcgtagcagataccctctgtacatgatgcagctgtaccgctctttc
aggactgttgagtcctcaccgtcagtagctgtcaacaccatcactacacgaggtgacaac
ccgtcagcacacagttctgactctgtcctaagtctgatggccaaaggttgccatcaagtg
ggtgaaagatggacagtcacattcgacatgtcagccatctctaccagtgaactcgtccag
ctggcagaactgcgaatcgggctgccagctttctctgcctctgagcacgccactgtggat
ttatatcactcccgaaaacagggctgtgacctgggcagcacatcgtgccaggatgagcac
cttttcttggggagttttggcacatcacccagtagcagcacaaagtcctcctggaaggtt
tttaatgtgactgctctgttaaaatactggctgtaccagggagatagagtgtcaagccag
gaggcctcaggggagtctgaaacagaccatgggagcggtgctggggaggagggggagata
agtagcaagaatttggggttgaggcaaagaaaaatacaccatccgaccacaaaccgggtc
atgatggtcatcttctccaaacacaacctgccacaggaaggccaagcagcatacagtctc
attcatactgtggagaactcaaagtatgtgactatggacagagtcagcagtgatagtcaa
agtcgacgacacaaaaggaaccgaatggagaggatgagagtggctgctggagctgcaccc
actgctgcaccggcagcagagccggtccagaggccactatgtcggagggtggacatgtgg
gtggactttgaccacattggctgggatgagtggatcgtacatcccaagcgctacaacgca
tatcgatgtgagggagagtgtcccacaccactggatgagtccttccatccaacaaaccat
gcatacatgcagagcctcttgcgacatcaccaaccagaaagagtgacttgcccatcctgc
gtgccaacacgcctcagcccgctctctatgctgtactatgagaacgatgatctggccctg
cggcatcatgaggatatgattgttgaagagtgtggctgtcactga
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