Lates calcarifer (barramundi perch): 108878168
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Entry
108878168 CDS
T04895
Name
(RefSeq) serine/threonine-protein kinase RIO2
KO
K07179
RIO kinase 2 [EC:
2.7.11.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108878168
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108878168
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcf03009
]
108878168
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108878168
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: Other
RIO family [OT]
108878168
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Pre-40S particles
Kinases
108878168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Rio2_N
Kdo
APH
ABC1
OspG_kinase
TCAD9
CCSAP
Motif
Other DBs
NCBI-GeneID:
108878168
NCBI-ProteinID:
XP_018524085
UniProt:
A0A4W6GAN2
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Position
LG13:complement(11207651..11212068)
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AA seq
519 aa
AA seq
DB search
MGKLNVVVLRYLSRDDFRVLTAVEMGMKNHEIVPVSLLSSIASLKHGGCNKILRELVKHK
LVVYERTKTVQGYRLNYGGYDYLALKTLCSREVIISVGNQMGVGKESDIYIVASPNEEQY
ALKLHRLGRTSFRNLKNKRDYHKHRKNVSWLYLSRLSAMKEFAYMKALYDRGFPVPKPVD
YNRHAVVMELINGYPLCQIHELQDPPALYNEFMELIVKLANHGLIHGDFNEFNLMLDDQD
HITMIDFPQMVSTSHPNAEWYFDRDVKCIRDFFAKRFNYESELFPTFKDIRRSYSLDIEV
SASGFTKDLERDGALLHPAGPEGEEDDEEEDNDEEATDEEEEREEDSVDMEEYKHAMLEL
EGLKVSDTHADRQDEEEEKSEKTEEQKETETAPAAGSDEETEKDLEEELKEAEDECPELT
DLSAANKEFKPFRDSDSLLHMAEHRRRRTDSEATMGSIGSCSTIPPEVIRQKVRRQLTKQ
QKAAQRRRLQKGEANLVTKSRRENQSNIKSSMESASFWG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctgaacgtggtggtgttgagatacttgtctcgagatgacttccgagtcctc
acagcggttgaaatggggatgaaaaaccatgagatcgtcccagtgagtctcctgtcatcc
atcgctagcctcaaacatggcggctgcaataagattctcagagagcttgtcaagcacaaa
ctcgtagtctacgaacgcaccaagactgtgcagggctacaggttgaactacggaggatat
gactaccttgccctgaagactttgtgctccagagaagtgatcatttcagttggcaaccaa
atgggagtgggtaaagagtcagacatatatattgtggcaagtccaaacgaagagcagtat
gctctgaagcttcacagattgggtcgcacctccttcaggaacctaaagaacaagagggat
taccacaaacacaggaagaacgtgtcctggctctacctctctcgcctctctgccatgaag
gagtttgcctacatgaaggcactgtatgatcgaggttttcctgttcccaaacctgtggac
tacaacagacatgctgtagtgatggagctcatcaatggatatccgctgtgtcagattcat
gagctccaggatccaccagccctgtacaacgagttcatggagctcatagtcaaactggcc
aatcacggcctgattcatggagactttaatgagtttaaccttatgttggatgaccaggac
cacataactatgatcgacttccctcaaatggtgtccacatcacatcctaatgctgaatgg
tattttgaccgagatgtgaaatgtatcagagatttctttgcaaaaaggttcaattatgag
agcgagctctttccaacattcaaagacatcaggcggtcttattctctagacattgaagtc
tcagctagtgggtttaccaaggatctggagagagatggtgcattgctacacccagcagga
cctgagggagaggaagatgatgaagaggaggacaatgatgaagaggcaacagacgaggag
gaagaaagagaagaggacagcgtggacatggaggaatacaaacatgcaatgttggaactg
gagggtctgaaagtcagtgacacacatgcagacagacaagatgaggaggaggaaaagagt
gaaaaaacagaagagcagaaagagactgagacagcacctgctgctggaagtgatgaagag
acagagaaagacttagaggaggagttgaaggaggcagaggatgagtgcccagagctgaca
gacctctctgccgccaacaaagagttcaaacccttcagagattcagacagtcttctgcac
atggcagaacacaggaggaggaggacagacagtgaggccacaatgggcagcatagggagc
tgctctaccataccaccagaggtgatccgtcagaaggtgcggaggcagctcaccaaacag
cagaaggcagcacagaggagacgtctgcagaagggggaggccaacttggtgaccaaatcc
aggagggagaaccaaagcaacatcaagtctagtatggagagcgcctccttctggggataa
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