Lates calcarifer (barramundi perch): 108878172
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Entry
108878172 CDS
T04895
Name
(RefSeq) RNA-binding protein FUS isoform X1
KO
K13098
RNA-binding protein FUS
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108878172
09122 Translation
03015 mRNA surveillance pathway
108878172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108878172
Spliceosome [BR:
lcf03041
]
Complex A
Other components
Complex A specific factors
108878172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
108878172
NCBI-ProteinID:
XP_018524096
UniProt:
A0A4W6DFI7
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All DBs
Position
LG11:complement(1124610..1136660)
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AA seq
547 aa
AA seq
DB search
MASNDYSQTSAQGYGSYGGGGGGGGGGGGANQGYGQSSGQSYSQQSYGGYNQGSDSSSGS
YNQGGYSSYSQPQSGGYGSPPPNQGGGGGYNHPSQSYGSGGYSSSNQPSNMSYNQQSSFS
GYSQQQPPPSSSAGSYEGNPQAPGYNQPPSGGQSGGGYGSSGGQSGGYGGSGSHQQPSQH
GGGHYNQPPSYSSPPPQSYSQQSQYSQGGGYGDDSPPMSGGGGGGYGGPDGGYGGQDGRG
GRGRGGGFGGRGGGGGGGYDRGFDRGGRGGPRGRGGMGMGDRGGFNKFGGPREPGHGHGG
PGFMQDQDNSDNNTIFVQGLGDDYTVESVADFFKQIGIIKVNKKTGLPMINLYTDRETGK
LKGEATVSFDDPPSAKAAIDWFDGKDFNGNPIKVSFATRRADFGGRGGMRGGRGRGGPMG
HGGFGGGRGGGFPGGNGGSGGGGGGGQQRAGDWKCSNPNCGNLNFSWRNECNQCKAPKPE
DAGGMPPMDRGGYGGERRGGFDRGGFRGRGGDRGGFRGGRGGDRGGYGPGKMDARGDRRQ
ERRGRPY
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaacgattattcccaaacgtcggcccagggctacggctcctatggtggagga
ggtggaggaggtggtggaggcggtggtgctaaccagggctacggtcagtcctctgggcag
agttacagccagcagagctacggaggctacaaccagggctcggacagcagctctggctcc
tacaaccagggaggatacagcagctacagccaaccccagtcaggaggatacggctctcca
cctcctaaccagggtggtggtggaggttataatcatcccagtcagtcctacggctctgga
ggctacagcagcagcaaccagccctccaacatgagctacaaccagcagtcatccttctct
ggttacagccagcagcagcctccaccttcatcctctgcaggcagctatgaaggaaacccg
caggcccccggttataaccagccgccgagcggtgggcagagcggaggaggttatgggagc
agtggaggtcagtctggtggatacggcggcagcgggagccaccagcaaccatcccaacac
ggaggaggtcactacaaccagcccccgagctacagctcccctcctccacagagctacagt
cagcagagccagtacagccagggcggaggatacggagatgacagcccaccgatgagcgga
ggaggaggcggagggtacggcggtcctgacgggggttacggaggtcaggacggccgcggt
ggcaggggccgcgggggtggatttggaggtcgtggcggtggcggcggcggtggatacgat
cgcggttttgaccgaggtgggcggggtggaccaagaggaagaggaggcatgggaatgggc
gatcgtggaggattcaataagtttggtggaccaagagagccggggcatggacatggagga
cccggattcatgcaggaccaggacaactctgataataacaccatcttcgtacaaggcctg
ggagacgactacactgttgaatcagtggctgatttctttaagcagattgggatcatcaag
gtcaacaagaaaacaggcctgcccatgatcaacctgtacacagacagagagacggggaag
ctgaagggggaggccacagtttcctttgatgaccccccctcagctaaggctgccatcgac
tggtttgatggtaaggacttcaatggaaaccccatcaaggtgtcctttgccacccgcaga
gctgactttggaggccgaggaggcatgagggggggtcgtggacgaggaggtccgatgggt
cacggaggattcgggggaggccgaggtggaggtttccctggaggcaacggtggcagcgga
ggaggtggaggaggggggcagcagagagctggagactggaagtgttcgaaccctaactgt
gggaacctgaacttctcgtggcgtaacgagtgtaaccagtgtaaggctcctaaaccagag
gatgctggtgggatgcctccgatggacagagggggttacggaggtgagcgcagaggcggg
tttgatcgaggcggcttcaggggccgaggcggcgaccgcgggggcttcagaggggggcga
ggaggagaccggggaggatacggcccgggcaagatggacgccaggggtgaccgcagacag
gagcgacggggccgaccctactga
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integrated database retrieval system
