Lates calcarifer (barramundi perch): 108878242
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Entry
108878242 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108878242
KO
K05421
cardiotrophin-like cytokine factor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108878242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108878242
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
CSF and other factors
108878242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNTF
Motif
Other DBs
NCBI-GeneID:
108878242
NCBI-ProteinID:
XP_018524250
UniProt:
A0A4W6DG44
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Position
LG8:complement(12895808..12910615)
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AA seq
509 aa
AA seq
DB search
MKRFCGVHQHQLLLLLAAAMATALDSSHNLASERSSIESTYELTKYLEYQLKEIKDVYLT
YLGPPFNEKDFSPPRPNSTALSLPSAATRLELWHGLENQARLAQNQKAYSVLLAAVRELA
RSTLCPSLKTSLLHFCTGLDGLLGSISALMTTLGYALPSPSANTGSNDGELQYPQRGAVG
DRPAPLMSQSLYRSRAGTRTESGQRSSQKRSGMRVIRGEQEDGVGVDLMEKRRGKEGRKA
EVTTAGGRSGGSRERGRGERGRRGKREEPESRRWAASEEERAGGEEEELEDEGGMEGWGR
RRRLLSISEDGEERVMQPEPGVTWSYPGTESSASIRQPTIRNENQYSYNLNSHHPDTIRK
EDGFILEKSTALMMAEEKKTDMEATSSSSAFYRQRRPPRSLFVPTLQPPLSTLSLLYQFG
AGEEHTLLPQPVPLSLRRGTSLLSPPLAPLLSSTSTSSSSSSPSSLLSVRPTMNDFARKV
EGFWILRELQSWLWRSAKDFNRLKKRLRG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggttttgcggagtccatcaacaccagcttctcctgctattggctgctgccatg
gcgacagccctggattcatcacacaacctggccagtgagaggagttcgatagagagcacg
tacgagctgaccaaatacctggagtatcagctcaaggaaatcaaagacgtatatctcacc
tacctaggccctccattcaacgagaaagacttctcccctccgcggccaaacagcacggct
ctgtccctgcccagtgctgccacacgcctggagctgtggcacggcctggagaaccaggcc
cgactcgcccagaaccagaaggcctactctgtgctcctggcggccgtcagggagctggcc
cgctccaccctctgcccctccctcaagacctccctgctgcacttctgcacaggcctagat
ggactgctgggctccatatccgcgctgatgaccacgctcggttacgcgcttccttctcca
tctgcaaacactggaagcaacgatggcgagctgcagtaccctcagaggggggcggtaggc
gaccgaccggctccgctgatgagccagagcctgtacaggtccagagctgggacaaggaca
gagtccggtcagcgtagcagccagaaacgaagcgggatgagggtgatcaggggggagcag
gaggatggcgtcggcgtagacttgatggaaaaaaggagagggaaagaggggaggaaagca
gaggtgaccacagctggaggaaggagcggtggatcaagggagaggggaagaggagaaaga
gggaggagaggaaagagggaagagcctgagagtaggagatgggccgccagcgaagaggag
agagcaggaggagaggaggaggagctggaggatgagggaggaatggagggatgggggagg
aggagaaggttattgagtatcagtgaggatggagaagagagggtgatgcagccagaacct
ggggtcacatggtcgtacccgggcacagagagctccgcctccattcgacaaccaaccatc
cgaaacgagaatcagtacagctacaacctgaactcacaccacccagacacaatcagaaaa
gaagatggatttattctagagaaaagcacagcgttaatgatggcggaggagaagaaaaca
gacatggaagccacctcctcctcctccgctttctatcgtcagcgtcggcctcctcgctcc
ctcttcgtacccaccctccaacctcccctatccaccctctccttgctctaccagttcgga
gcgggcgaggagcacacccttctcccccagcccgttcctctgtctttacgaaggggcacc
tccctcctttcgccccctctggctccgctgctctcctccacctccacctcttcctcctct
tcttccccctcctcgctcctgtccgtgcggccgacgatgaacgacttcgccaggaaggtg
gaaggcttttggatattgcgggagctgcagagctggctgtggcgatcggcgaaggacttt
aaccgcctcaagaagagactccgaggctga
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