Lates calcarifer (barramundi perch): 108878284
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Entry
108878284 CDS
T04895
Symbol
mef2cb
Name
(RefSeq) myocyte enhancer factor 2cb isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108878284 (mef2cb)
04371 Apelin signaling pathway
108878284 (mef2cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108878284 (mef2cb)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
108878284 (mef2cb)
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Motif
Pfam:
HJURP_C
SRF-TF
Motif
Other DBs
NCBI-GeneID:
108878284
NCBI-ProteinID:
XP_018524328
UniProt:
A0AAJ7LIG1
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Position
LG13:complement(12362219..12436797)
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AA seq
521 aa
AA seq
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MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI
NEDIDLMISRQRLCALSKKENKGGESPELESALILTPRTEEKYKQINEEFDHMIKTHKIP
QAVPPSNYDMPVSIPVSNQNNLIYSHPGGSLGNHNLLPLAHHGLQRNSMSPGVTHRPPSA
GNTGGLMGADLTTGAGTSAGNGYGNHRNSPGLLVSPGGMNKNMQAKSPPPMNLGMNNRKP
DLRVLIPPGAKNNMPSINQRINNSQSAQSLATPVVSVATPTLPGQGMGGYPSAISTSYGT
EYSLNSADLSSLSGFNSGSSLHLGSMSGWQQQHLQNMQHSALGQLGNCSSSHLCQGSNLS
LPSAQSLHIKSEPVSPPRDRTSSTPGGYGGGVPPPQNPSSRQDSGRSPVDSLSSCSSSHE
GSDRDEHRNEFHSPLGLARPALDERESPSIKRVRLSEGWAT
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacgcggattatggatgaacgcaacagacaggtgaca
tttacaaagcgaaagtttggcctgatgaagaaggcgtatgagctgagtgtgctgtgtgac
tgtgagattgccctgatcatcttcaatagcaccaacaagctgttccagtatgccagcaca
gacatggacaaggtcctgcttaaatacaccgagtacaacgagccccacgagagcaggacc
aactccgatattgtggagacattgagaaagaagggcctaaatggctgtgacagcccagac
cccgacgcagacgactcggtcggccacagccccgagtccgaggacaagtacaggaaaata
aacgaggacattgatctgatgatcagcagacagagactgtgtgcattgagcaagaaggag
aacaaaggcggcgagagcccggagctcgagtctgctctcatcctcaccccacgcactgag
gagaaatacaaacagattaacgaggagtttgatcacatgattaaaactcataagatacct
caggctgtgcccccatcaaactacgacatgcccgtgtccattcccgttagcaaccagaac
aatctcatttacagccatcccggtggttccctaggcaaccacaacctgttgccactggcg
caccatggcctacagagaaacagcatgtctcctggagttacgcacagaccccccagtgca
ggtaacacaggtggcctcatgggtgctgacctcaccactggcgcaggcaccagtgctgga
aatggatatgggaaccaccgcaactcacccggcctgctggtttctccaggtggcatgaac
aagaacatgcaggctaagtcccccccaccaatgaacctaggcatgaacaaccgcaaacct
gacctacgtgtgctcatccctcctggcgccaagaacaatatgccctccatcaaccagaga
ataaacaactctcagtctgctcagtcattggccaccccagtggtatcagtagcaactccc
actctaccgggacaaggcatgggtggttacccatctgccatctctacttcttatggtacc
gagtattccctgaatagtgcggatctgtcctccctgtctggcttcaacagtggcagttcc
cttcaccttggctcaatgagtgggtggcaacagcaacaccttcagaacatgcagcattca
gccctcggccagctaggaaattgctctagctctcacttatgtcagggttcaaatctctcc
ctgccctctgctcaaagcctgcacatcaagtccgaacctgtttctcctcctagagatcgc
accagcagcacaccggggggctacggtggtggggtaccacctccccagaacccctcgtcc
cgccaggactcgggacgctcccctgttgatagcctgagcagctgtagcagctcccacgag
ggcagcgaccgcgatgagcacaggaatgagttccactcacctctgggactggcccggccc
gccctggatgaacgcgagagcccttccatcaaacgggtgcgcctgtcggaaggatgggca
acatga
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