Lates calcarifer (barramundi perch): 108878289
Help
Entry
108878289 CDS
T04895
Symbol
nipbla
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108878289 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108878289 (nipbla)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108878289 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
108878289
NCBI-ProteinID:
XP_018524350
LinkDB
All DBs
Position
LG13:8648675..8677068
Genome browser
AA seq
2551 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKNVMQQPMVPP
FKITQNSMHSPAPPANYQPAAISPSPSSRFVAPQPGSSSRYMGQQNSPVPSPYTPQSPAT
GYIQQYPHQQPPSYNPHQQIQQASVASPMVPGGIRNIHEGKVSGQMANAANHHSDRHGTE
DYLNIVHRLGNEEGDSAMRNPSFPLRSPQSGCSPAGSEGTPKPGSRPPLILQSPPPYAPS
PREGGPDQKQQLQQRKKAPAVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSNESDPPGEVV
PGMDQNSDNMETELGFQQVPVLQQNLGPRLQQQQLSQQAGGASGLQPPSSPYDEAELDAL
AEIERIEREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNA
GKLTPQEATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGP
AAVEGSDTALRLKPDGRPEVIKNRVDKHDSRRDGRESSKHRHDEKSSDRRGEMPKSSNRG
EHGRDRDRESDRDRRHRSETGGRDRRSPDSRCRSDRDRSGFRASSTGEPGRSSSRQDGSK
PASSASGAKLPDSFPAQLLGGHSGALKNFQIPKIKRDKDSSGSTEGQMWGQPKVKLERLG
LVQDFEKRPKPVVVLKKLSIDQIQRIIRHSKSGKNRLSSGKSGKGGMDPAVLKELPPELL
AEIESTMPLCERVKVNKRKRSTVNERPKYAEVSSDEDFDANGESARKRQRRDKDRTWDAE
ERERRGSGDHRKSGHRDSRRGSGSRYRDSSEEDSPPPSMSEIARKMKMKEKQKKRKAYEP
KLTQEELMDSSTFKRFLASIDNILENLEDVDFTAMAADDDEIPQELLLGKHQLNELGSES
AKIKAMGISSRIPSDKLVKLLNILEKNIQDGSKLSTMMNHDHDAEDEERLWRDLIMERVT
KSADACLTALNIMTSAHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGM
LSSKAKRAKCSTHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVE
NVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPM
YIQMVTALVLQLIQCVVHLPSDKETFEEYDTKVDQDVLITNSYETAMRTAQNFLSVFLKK
CGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVA
SLDYLGTVAARLRKDAVTSKMDQRSIDRILQQSQGNDETQQLQKALLDYLEENAETDASL
VFARKFYIAQWFRDATTEAEKSMRNQNPKDEDSSDGPQHAKELESTGEIMQRAEKRKKFL
RNIIKTTPAHFTTLKMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIA
VRTKAMKCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTE
QYYDMLIERILDTGISVRKRVIKILRDICLEQPTFSKITEMCVRMIRRVNDEEGIKKLVN
ETFQKLWFTPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPA
KKACVQLVDNLVEHILKYEESLAENRGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQP
YLTTKCNTANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCV
SCLGAVVNKVTHNYKFVWACFNRFYGALNKLKIQHQEDPNSATLVANKPFLLRSLFTVGA
LARHFDFDLEEFKGTNKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFM
PEVKSLYNGILADSASSINLKIQILKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGD
ISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTD
PEPSMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYNLQQAIDLSRKSIIRGFRQDETHS
ALCSHLFTMIRGNRQHRRAFLISLLNLFDDSAKTEVNMLLFIADNLACFPYQSQEEPLFI
MHHIDITLSVSGSNLLQTFKELLLKEPRRKEKKVKKEWKNTSDGEDEEEKMNCDFPRSDD
EENSNSDDDNDDDDVVRRPKKARKPVADSESSESDLEDLDVEDVEKVMRLLPDNPTGLLD
FANAVQGILLLLVLKQHLKNQYGFSDSKIQKYSPTESAKVYDKAVNRKSNIHFHPRQTID
FISNNMARASLTDDVKKRIVKQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLG
SSGPMSGPSPRNQAGPETDDDDSDGDERTPGSSRRSRRAGDSSDPGRMSETVEAMDVIAL
CCPKYKDRPQIARVINKTSNGYSIHWMAGSYSGPWAEAKKRDGRKLVPWVDTIKESDIIY
KKIALTSNHKLSNKVVQTLRSLYAAREGGAS
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggatcgctagcttaaca
gacttgttgaaccagctacccctcccttcccctctcccggccaccaccactaagagcctc
ctatacaatgggaggatcgcggaggaagttacctgcctactgggctgtcgggatgagaat
ctggcctcccagctagcccatggcctaaaccaggtctccacagagcacatagagctgaag
gacaacctgggtagcgatgagccagagggagatgcaccactgttgctgcagaccatgctg
gccaggaaccctggcatcttcagggagaaaaatgttatgcagcaaccaatggtaccaccg
ttcaagatcacccagaattccatgcacagccctgccccacctgcaaactaccagccggct
gcaatttctcccagtccatcaagtcggtttgtggcgccgcagcctgggtccagtagccga
tatatgggccagcagaacagtccagtacccagcccttacactccccagagccctgccact
ggttacatacagcagtatccccaccaacaaccacccagctataacccacaccaacagata
caacaagcatctgtggccagtcccatggttccaggcggcatacgaaatatccatgagggc
aaagtatcggggcagatggccaatgctgccaaccaccactcagacagacatggcactgag
gactaccttaacattgtacaccgactgggcaatgaggagggtgactccgccatgaggaat
ccttctttccctctgaggtctccgcagtccggctgttctccagcagggagtgaaggaacg
cccaaaccgggttctcgccccccactgattctgcagtcaccacctccctatgcgccctca
ccgagggagggaggacctgaccagaaacagcagctccagcaaaggaagaaggccccagca
gtgaaagaggagaaggacatgtatgacattgttagctctccaaacaaggactctacaaaa
ctcaccctcaaactatccagggtcaagtcaaatgagtccgatcccccaggtgaggttgtg
ccgggcatggaccagaactcagacaatatggagacagaactgggctttcagcaggtgcct
gttctccagcaaaatctaggaccccggctgcaacaacagcagctctcccagcaagcaggt
ggtgccagtggcctccagcctcccagttccccttatgacgaggcagagctggatgccctc
gctgaaattgaaaggatagaacgggaagcagctagtgagaagtgctccaaggaagtgcaa
gataaagacaagccactgaagaagagaaaacaggactctttccccctagagccaggtgca
gggggaccaggtggccccacaggtgctccagggagcggatcaacaggagggggcaatgct
gggaaactgaccccacaagaggccaccgcagctgggaatggtgccagccgtcctccccta
atggtgagcatcgacctccagcaggcaggccgagctgatggccagctcgacccctgtctg
gctgcccctattccagcccttgaggcccaacgctggcctgaagaaccagctagcgggccg
gctgcagtggagggttctgacacagctttgcggttgaaaccagatggacgaccggaagtc
atcaagaacagggtcgataaacatgacagcaggagagacggtcgggagtcatcgaagcac
cgacatgacgagaagtcctcggacagacggggagaaatgccaaagtcatcgaaccgaggg
gaacacggacgagacagggaccgagaatctgacagagataggaggcatcggagcgagact
ggtggtcgagaccgacgctcccctgactctcgctgccgaagtgaccgagataggtctggt
ttccgggcctcttccactggagagcctggtcggagcagcagtaggcaagatggttccaaa
ccagcctcctctgcttctggtgctaaacttccagattctttccccgctcagctcctggga
gggcatagtggcgcgctgaagaacttccagatccctaagatcaaacgtgataaggatagc
agtgggtcaactgaaggtcaaatgtggggccagcccaaggttaaactggagaggctgggt
ttggtgcaggactttgagaagaggcccaagcctgtagtggttctgaaaaagctctccatt
gaccagatccagaggatcatccggcacagcaagtctggaaagaaccgtctctcatcaggg
aagtctggtaaaggtggtatggacccggcagttctgaaggagcttcccccagagctactg
gcagagattgagtcaaccatgccactgtgtgaaagagtaaaagtgaacaagagaaaacga
agcactgtaaatgagaggcccaaatatgctgaggtcagctcggatgaagactttgacgca
aacggagagtctgcaaggaagcggcagcgcagagataaagacaggacctgggatgctgaa
gaaagggagcgccggggttcaggggatcatcggaaaagcgggcaccgggacagccgacga
ggctcaggcagtcgctaccgagactcctctgaggaagattcgccgccacccagcatgagt
gaaattgccagaaaaatgaagatgaaggagaagcagaagaaacggaaagcatatgaaccc
aagctgacccaagaagagttaatggactcatccacattcaagaggttcttagcaagcatt
gacaacatactggagaatctggaggatgtggatttcactgccatggcagcagacgatgat
gagatacctcaggaactgctgcttgggaaacaccagttgaatgagctgggcagtgagtct
gccaagattaaggccatgggcatctccagcaggatcccatcagacaagctggtgaagctg
ctgaacatactggaaaagaacatccaggatgggtccaagctgtctaccatgatgaaccat
gaccatgatgctgaagatgaggagagactttggagagacctgataatggagagagtcacc
aagtcagcagacgcctgtctgacagctcttaacatcatgacctcagcgcacatgccgaag
gctgtctacatagaggatgtcatagagcgggtgctacagtacaccaagttccatcttcag
aacactctgtatccgcagtatgacccagtctacagggtggacccacatggaggtggcatg
ttgagctccaaggcaaagcgtgcgaaatgttccacacacaagcagcgtgtgatcgttatg
ttgtacaacaaagtgtgcgacattgtcagcaacatttctgagctcctggagatccaacta
cttacagacaccaccatcctccaggtttcttctatgggaatcactccgttctttgtggaa
aatgtcagtgagctgcagctgtgtgccattaaactagttacagcagtgttctcacgttat
gagaagcatcggcagctgatcttggaggagatctttacctctttggccagactgcccacc
agcaaacgctccctcaggaatttcaggctgaacagctcggaccaggatggagagccgatg
tacatccaaatggtgaccgctctggtgctgcagctgattcagtgtgtggtccatcttccc
agtgacaaggaaacttttgaagagtatgacaccaaggtggatcaagatgtgttgataacc
aactcatacgagacggcaatgagaacagcacaaaacttcctctcagtcttcctcaaaaag
tgtggcagcaagcagggagaagaagattaccggccattgtttgagaacttcgtccaggac
ctgctctcgacagtaaacaaaccagagtggcctgctgcagagctgctgctcagtctgctt
ggtagactactggtacaccagttcagtaataagcagacagagatggctctgagagtagca
tctctagactacctgggtacagtggctgcccgtctgaggaaggacgcagtcaccagcaag
atggaccagagatcaattgatcgtattctacagcagtctcaaggtaacgatgagacgcag
cagctgcagaaggctctactggactacttggaagaaaatgctgagacagatgcgtcactg
gtgtttgctagaaagttctacattgcccagtggttccgggacgccaccacagaggctgag
aagtccatgcggaaccagaatccgaaggatgaggactcatcggatggaccacaacatgcc
aaggagctggagagcactggtgaaattatgcagcgtgctgagaagcgcaagaagttcctg
cgcaacatcatcaagaccacgccagctcatttcactacactgaaaatgaactctgacact
gtggactatgatgactcctgtctgattgtgcgttatttggcctccatgaggccgttcgcc
cagagctttgatatttatttaacacagatcttgcgagtccttggggaaagtgccatcgct
gtaaggactaaagccatgaaatgtctatctgaggttgtggctgtggaccccagcatactg
gcaaggtctgacatgcagcgtggcgtccatggtcgtttgatggacaactccaccagtgtg
agagaggcagctgttgagctgctaggcaaatttgtccttagcagaccccaactcactgaa
cagtactatgacatgctcatagagaggatactggacactggtatcagcgtaagaaaacga
gtgatcaagatcctcagagacatctgtctggaacagccaaccttcagtaagattactgag
atgtgtgtgaggatgatccgcagagtcaatgacgaagagggtatcaagaaattggtgaat
gagacattccagaagttgtggtttaccccgactccagcccatgacaaggagaccatgacc
agaaaaatcctgaacatcactgatgtggttgcagcatgtcgagacactggctatgactgg
tttgagcaacttcttcagaatcttctcaagtctgaagaggatgcatcctataaaccagcc
aaaaaggcctgtgttcagctagttgacaatctggtagaacacatcctcaaatatgaggag
tctcttgcagagaacaggggtgtaaactcaacacggctagtggcatgtatcaccaccttg
tacttgttcagtaagatcagggcccagctcatggtcaaacatgccatgaccatgcaaccc
tacctgaccacaaagtgtaacactgccaatgacttcatggtcatctgtaacgtggcaaag
atcttggaacttgtggtaccgctgatggagcaccccagtgaaactttccttgccaccatc
gaagaagacctcatgaagctcatcatcaaatacggcatgactgtggtccagcactgtgtg
agctgccttggagctgttgtcaacaaagtgacgcacaactacaagtttgtctgggcttgt
ttcaacagattctatggtgcacttaacaagctcaagattcagcatcaggaagatcctaac
agcgcaacattggtagcaaacaagcctttcctgctgcgatcactcttcactgtaggtgcc
ctggcccgacactttgattttgatttggaggagttcaagggcaccaacaaggttgttatc
aaggaaaaagttctcgagctgctgctatacttcaccaaacatgaggacgaggaggtcaag
accaaagccatcatcggcttaggcttccttgtgatcatgcatcccagccagatgttcatg
cctgaggtgaagtccttgtacaatggcatcttggctgacagcgcctcctcaatcaacctc
aaaatccagatcctcaaaaacctccagacataccttcaggaggaggacacacgaatgcag
gaagcagacagagaatggaagaaactgtccaaacaggaggatttgaaggagatgggagac
atctcttcagggatgagcagctccattatgcagctttatctaaaacaggtgttggaggca
ttcttccacacccagtccagtgtacggcactttgctctcaacgtcatagctctcacactc
aatcagggtctcatccatcctgtacagtgtgtaccctacctcattgcaatgggaacagac
ccagagcccagcatgaggaacaaagctgatcagcagctggtggagattgacaagaagtac
acaggattcatccatatgaaggcagttgctgggatgaagatgtcatacaatttgcagcag
gccatcgatctgtctcgcaagagcatcattagaggttttaggcaggacgagacccactca
gcactctgctcccacctcttcactatgatccgggggaaccgccagcaccgcagggctttc
ctcatctccctgctgaacctctttgatgacagtgctaagacggaagtgaacatgttgctg
tttatagcagacaacctcgcctgtttcccataccagagccaggaggagcctctcttcatc
atgcaccacatagacatcaccctgtcagtttctggcagcaacttgttgcaaaccttcaaa
gagcttctgttaaaggagccgagacgtaaggagaagaaggtaaagaaggagtggaagaac
acgtcagatggggaggacgaagaggaaaagatgaactgcgattttcccaggagcgacgat
gaagaaaacagcaacagcgacgatgacaatgacgacgacgatgtggtacggcggcctaaa
aaggccagaaaacctgttgcagactctgagagctcagaatctgatctggaggatttggat
gtggaggacgtggaaaaagtaatgaggctcctcccagacaatcccacaggtctcttggac
tttgctaatgctgttcagggcatcctgttgctgctggtcctcaaacagcatctgaagaac
cagtatggattctctgacagtaaaattcagaagtactctccaacagagtcagccaaggtg
tacgataaggcagtgaacagaaaaagcaacattcacttccacccacggcaaaccattgac
ttcatctccaacaacatggctcgtgcttcactgacagacgatgtcaagaagcggatagtc
aaacagtacctagatttcaaggttctgatggaacatctggacccagacgaggaggatgag
gagggagaggcgtctgccagtgctaacatcagaaacaaagccataaacgccctgttggga
agctccggacccatgtcagggcccagtccacgcaatcaggcaggaccagagaccgatgac
gatgatagtgatggcgacgaaaggaccccagggtcctctcgaaggtcaaggcgagcgggt
gactcctcggaccccggccgtatgagtgagacagtggaggccatggatgtgattgccctt
tgctgccccaaatacaaggaccggccgcaaatagctcgagtcatcaacaagacctccaac
ggatacagcatccactggatggctggctcctactcggggccctgggcggaggccaagaaa
cgcgatggccgcaaactggtgccttgggtggacactattaaggagtcggacatcatttac
aagaagattgccttgaccagcaaccacaaactgagcaacaaagtagtacagactttacgc
tcactgtatgcagcgcgggaaggaggggctagctaa
DBGET
integrated database retrieval system
