Lates calcarifer (barramundi perch): 108878297
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Entry
108878297 CDS
T04895
Symbol
atoh1a
Name
(RefSeq) protein atonal homolog 1a
KO
K09083
atonal protein 1/7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108878297 (atoh1a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Atonal
108878297 (atoh1a)
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GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
108878297
NCBI-ProteinID:
XP_018524361
UniProt:
A0A4W6BUA5
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Position
LG13:complement(7491760..7497565)
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AA seq
369 aa
AA seq
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MDVLSVDDWSKDALEAVAVLGSRHQSPRVVERGGKQQLEESRYEPGLTLVDSSSDPRAWL
ASVQPSGTCAAHASSPDYLRHSPCPSTGSFQENGSPGSSGHPSPPSYRKSAKSPSSSSLK
VRDLCRLKGTVTGLDEDASARQRAPSSKPVSGIQKQRRVAANARERRRMHGLNHAFDELR
SVIPAFDNDKKLSKYETLQMAQIYINALAELLQGPVSSNNSNTDISNSNNNSPKCDIMLS
SAVGFDGAKDRASPSPTACRTAAAVPVSGSSLPVHISGAPFRSAFDDGSFSAMVEEAMCS
PSPSSSTRAGSSLAPVGGGRKESPRSDGEFSPHSHFSDSDEIAMELHSSEEDDLSELKLP
SHHHHSVSF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcctaagtgtggacgactggagcaaagacgcactggaggcagtggcagttctc
ggctcgcggcatcagagcccgagagtggtggagaggggagggaagcagcagctcgaggag
tcccgctacgaacctggactgacgctcgtggacagcagcagtgacccacgcgcctggctg
gcttcagtgcagccttctggcacctgcgcggcacacgcctcttcacccgactacctgcgg
cactcgccatgcccgagcaccggctccttccaagagaatggctccccggggtcatcgggc
catcccagtcctcccagctacagaaaatctgccaagagcccctcctcttcttcgctcaaa
gtcagggacctgtgccgtctcaaaggcacggtcaccgggctcgatgaggatgcatccgcg
agacagagagccccatccagcaaaccggtcagcgggatccagaaacagaggcgcgtggcc
gccaacgcgcgcgagaggaggcggatgcacgggcttaaccacgcgttcgacgagctgcgc
agcgtcatcccggcgtttgacaacgacaagaaactctccaaatacgaaactttacagatg
gcgcagatttacatcaacgcactggcagagctgctccaaggtcccgtctcctccaacaac
agcaataccgacatttccaacagcaacaacaactcgccaaagtgtgacattatgctttct
tccgccgtcggttttgacggagcgaaagacagggcttccccttcccctacagcctgtagg
acggcggcggccgtgcccgtctcaggtagcagcttacctgtccacatcagcggggcgcct
ttccgctccgccttcgacgacggttcgttttccgccatggttgaagaggcgatgtgttcg
ccttctccttcttcctccactcgggctggcagctccctggcaccggtcggaggtggaagg
aaagagtctccccggagcgacggagagttttccccgcactcccacttcagtgactccgat
gaaatagcgatggagctccactcaagtgaagaagatgacctttcagaactcaagctaccc
agccaccatcatcactcggtttctttctaa
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integrated database retrieval system
