Lates calcarifer (barramundi perch): 108878304
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Entry
108878304 CDS
T04895
Symbol
ssh1a
Name
(RefSeq) protein phosphatase Slingshot homolog 1 isoform X2
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108878304 (ssh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108878304 (ssh1a)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108878304 (ssh1a)
3.1.3.48 protein-tyrosine-phosphatase
108878304 (ssh1a)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
108878304 (ssh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Y_phosphatase
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
108878304
NCBI-ProteinID:
XP_018524382
UniProt:
A0A4W6GB25
LinkDB
All DBs
Position
LG13:complement(10538371..10558185)
Genome browser
AA seq
1055 aa
AA seq
DB search
MALVTLQRSPTPSAASTASTATTTAGEDFGSEDERRINQSLSESFFMVKGAALFLQQGSS
QQGQKAHPHHKHAGDLPQHLQVMINILRSEDRIKLAVRLESAWSDRVRYMVVVYTSGRQD
TEENILLGIDFTNKDCKSCSIGMVLPLWSDTKIHLDGDGGFTVNTAGRTHVFKPVSVQAM
WSALQVLHKACEVSRRYNYFPGGMALTWMGYYESCIASDQSCINEWNAMKDLETTRPDSP
TMFVDKPSERERTECLIKAKLRSIMTCQDLENVTCKQIRTELEQHMNCNLKEYKEFIDNE
MLLILGQMDKATLIFDHVYLGSEWNASNLEELQETGVGYILNVTREIDNFFPGTFSYHNI
RVYDEEATDLLAHWNDTYNFIVKAKKNHSKCLVHCKMGVSRSASTVIAYAMKEYGWSLEK
AYNFVKQKRSITRPNPGFMRQLAEYEGILDASKQRHNKLWHPDADCEMAEGQQGLAQCCG
GGEGGHVTPEPGMSPCCEEALSDKGAACPSPCRTVALEIDPAYNNYYFRRLSDSALDSEP
STPVRGPPLLAMEKVFIEIEDVERDALLDDEAFDGREGLPLPHFGPTAEGTAAQTCSRGP
EPLEELRLRLEFSTVEEEDEEEVQKEEAEMEVLMQPDDGGGGEGGGGEETQDVEVEGDTE
GNGMDLASLNENSNNNNHLSPPCNHNEKASSIIPQANASTVSWWDSKSNQKEDSPTLASK
LCLNPSPLEVPSAPFPESHTSSEDLVSSVGLLCPCGPLCDCANCAASPPTALLDREEQPG
ESLGLVEPEDSGDLSEVKTELYKSQSAATSEALPELVRMDLEEEKPAVACYLSQQQETLV
QLRRSGLVRRRAERLERLSGSSQESLHSLKTLHACQRSKRSPFHTDEEEEFSGCTGDFTK
SSTPCQVRLEPLVMPLTNEALLGVVGSGLLTPTSSPHGSTLTRSSSSDSLRSVRGKPGLV
RQRAQEIETRMRLAGLTVPSRLKRSNSLAKLGSLNFSSEDLCSACSSDAGTLLLLSLSPE
PDTGLEWDSPTASALHRPYKDLRTPEKALPGEPRS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggttactctgcagcggtccccgaccccgagcgccgcttccaccgccagcaca
gcaaccacgaccgcgggggaggattttgggagtgaagatgaacggcgaataaatcagagc
ctgagtgagagcttcttcatggtgaagggtgctgctcttttcctgcagcaggggagcagt
caacagggccagaaagcacatccccaccacaaacatgcaggtgacttacctcaacacctg
caggtgatgataaacattcttcgctcagaggacagaatcaaactggcggtgcggctggag
agtgcatggtcagatcgtgtgcggtacatggtggtggtgtacaccagtggacgacaggac
acagaagaaaacatcctactgggaattgacttcaccaacaaagactgcaaaagctgttcg
atcggcatggtgctacctctgtggagtgatacaaagatccatctcgatggagatgggggc
tttactgtgaacacagcaggtcggactcatgtcttcaaacccgtgtcggtgcaggcaatg
tggtcagctctgcaggtgctgcacaaggcgtgtgaggtgtcacgcaggtataactacttc
cccggaggcatggctctcacctggatgggatactacgagagctgcattgcttcagatcag
agctgcatcaacgagtggaacgccatgaaggacttggagaccacgcggccagactcaccc
accatgtttgtcgacaagccttcagagagagagaggacagagtgccttattaaagccaaa
ctcagaagcatcatgacgtgccaggaccttgagaacgtcacctgcaaacagatccgtaca
gagttggagcaacacatgaactgcaacctgaaggagtacaaagagttcattgacaatgag
atgctgctgatcctgggccagatggacaaggccactctcatctttgaccacgtctacctg
ggatccgaatggaatgcgtctaatttggaggagctgcaagagacaggggttggctatatc
ctcaacgttaccagggagatagataacttctttccaggcacattcagttatcacaacata
cgcgtctatgatgaggaggccactgacctgctggctcactggaacgacacatacaacttc
attgttaaagcaaaaaagaaccactccaagtgtctagttcactgcaagatgggtgtcagt
cgttctgcctccaccgttattgcttacgccatgaaggagtacggctggtcactggagaag
gcctacaacttcgtcaagcagaaaaggagcatcacacgaccaaacccaggtttcatgaga
cagctggcagagtatgagggaatcctggatgccagcaagcagcgacacaacaagctgtgg
catccagatgcagactgtgagatggcagagggacagcaggggctggctcagtgttgtggg
gggggtgagggaggccacgtgactcctgagccagggatgtctccctgctgtgaggaggcg
ctctctgataaaggtgcggcgtgcccctccccgtgcaggaccgttgcattggagattgac
cccgcctacaacaactattacttccgccggctctccgactctgcgctggacagcgaacca
tcgacacctgtgcgcggccccccgcttctcgccatggagaaagtatttatagaaatcgag
gacgtggagcgtgacgctctgctggatgatgaggcctttgatgggcgtgaaggcctgccc
ctcccccacttcgggcctacggcagagggaactgctgcccagacctgcagtcgtggccct
gagccgctggaagagctgcgtcttaggctggagttcagcacagtggaggaagaggatgag
gaggaggtgcaaaaggaggaggcagagatggaggtactaatgcagccagatgatggaggg
ggtggggaaggaggcggaggagaggaaacgcaagatgtggaggttgagggggatacagag
ggtaatgggatggacctggcatccctgaatgaaaattccaacaacaacaaccatctgagc
cctccatgtaaccacaatgaaaaagcttcctccatcattcctcaagccaatgcttctaca
gtgtcttggtgggattcaaagtccaatcagaaagaagactctccaacccttgcttctaaa
ctttgccttaaccccagtcctcttgaagtcccaagtgctccattcccagagtcccatacc
tcttctgaagaccttgtgtcttcagtgggactgctgtgcccctgtggccctctgtgtgac
tgtgccaactgtgctgcctcgccacccacagctctgctcgacagagaggagcagccagga
gaatcactgggcttagtggagcctgaggacagtggtgatctgtcggaagtaaagactgag
ctttacaaaagtcaatctgcagctacctccgaggctctccctgagctggtgagaatggat
ttggaggaagagaagcctgcagtggcttgctaccttagccaacaacaggagacgcttgta
cagctgcggagatctgggctggtccgccggcgtgcagagagactagagagactttcaggt
tcatctcaggagagcctgcactctctgaaaactttgcacgcatgccaaaggtccaagagg
agcccctttcacaccgatgaggaagaggagttctcgggctgtactggggacttcactaaa
tcttcgacaccatgccaagtgcggttagagccactggtgatgccactgaccaatgaagcc
ttgttgggggtggtggggtctgggctgctcacacccacctcctcgcctcacggctccacc
ctgactcgcagctccagcagcgacagcctgcgcagcgtgagggggaaacccggtctcgtg
cgccagagggcgcaggagatcgagacccgcatgaggctggcaggtctgaccgtgccctcg
aggctgaagcggtccaactcgctggccaagttgggcagcctcaacttctcctccgaggac
ctgtgttcagcctgctcctcggacgcaggaacgctgctgctcctctcactgtccccagag
ccagacactggcctggagtgggactcccccactgcctccgctctgcaccggccctacaag
gacctgcgcactccagagaaagcactaccaggtgagcccagaagctga
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