KEGG   Lates calcarifer (barramundi perch): 108878314
Entry
108878314         CDS       T04895                                 
Name
(RefSeq) zinc finger RNA-binding protein
  KO
K13203  zinc finger RNA-binding protein
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108878314
Spliceosome [BR:lcf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    108878314
SSDB
Motif
Pfam: DZF_N DZF_C zf-met zf-C2H2_jaz zf-U1
Other DBs
NCBI-GeneID: 108878314
NCBI-ProteinID: XP_018524403
UniProt: A0AAJ7LKU9
LinkDB
Position
LG13:21458277..21484650
AA seq 1074 aa
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAATAAAYGGYQPTHAATDYGYPQRQPEV
PPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAVAAAQPQPSVADSYYQTA
PKPGYSQGVTSYTQSQQTRQVTVIKPAAPSPASSTFSIYPVTSTVQPVAAAASVVPSYSQ
SPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQAVAAVAATAAWTGNSFTKKPP
FQSKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSSSSGS
GGGVLARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMVT
QTSSSTTAAPSKTTTATLNSSSSTSSLCVAASSSPATSSSPPYLKPVNIVSSGVAGVKNS
LANNLSAANSASAGKKVSTPKINFVGGNKLQTTVKMDEARAEAKVESSKPATPSSGSQDP
KTEVSDSLSTSALAGLQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHL
KGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRR
YEEDMYWRRMEEEQHHWDERRRLPDGGYPQGPPGPPGLLGVRPGMPGLQPQGPVPPRRPD
SSDDRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQDKAKEEDKEKKESCK
DRALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKGLLTRIVEHLPKQLTMVTPEKYE
VKGSIQEAAIILTSCTEPKMQVTITLTSPVIREENGRDGDVTSGMVKDPADVLDRQKCLD
ALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAISSASAP
LSPGDALRRVFECISSGILLPGGPGLVDPCEKKPVDTLTPMGEQQREDITSSAQFALRLL
AFRQIHKVLGMDPLPQINPRFNIRNSRKRRRDNSDGTDSFEGEGKKDKKDYDSF
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgattcccatatgtcctgtagtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaattactttggatttacccatggcgctgccgcccagtacagc
cagcagccagctgccggggtagcatacacacatcccaccacagtggccagttacacagtt
catcaagcacctgtggcggcacacactgtggcagcagcctacgctcccaccgcagccaca
gtagctgtagctaggcctgcaccagttgccgtggcagctgctactgctgcagcttacgga
ggataccagccaacccatgctgccactgactatggctaccctcagcgccagcctgaagtc
cctccaccaccaccacccgttacctctcagaactaccaggactcctactcctatgtccgt
tccacagctccagctgtagcttatgacagtaagcagtattatcaacagcccactgctaca
gcagctgttgctgctgcacagccacaacccagtgtggcagattcctactaccaaacggct
cctaaaccaggatatagccagggggtaacatcatacacccagagccagcagactcgacag
gtgaccgtgataaagccagctgctcccagtccagcctcttccacgttctccatctaccct
gtgacctccactgtccagcctgtggctgctgccgcctctgtggtcccgtcttactcccaa
agcccaacctacagcacaaatgctgtcacctactctggaacttcatactcaggctatgaa
gcagcagtttactcagcagcctccagctactaccagcagcagcagcagcagaagcaggca
gtagcagctgtagcagcaacagcagcatggacagggaactctttcaccaagaaaccaccc
tttcagagtaaacagcttcggcccaagcagccgccaaaaccccctcagatccactattgt
gatgtctgtaagatcagctgtgctggcccacagacttacaaggaacatttggaaggacag
aaacacaagaagaaggaagcagcattgaaggtttcccagagcagcagcagcagtggtagt
ggtggaggggtgctggcccgcaatgctcagaaccagcttcgctgtgaactttgtgatgtt
tcctgcactggggccgatgcctatgctgcccatatccgcggagcaaagcaccagaaggtt
gtgaagcttcataccaaacttggtaagcccattccatctacagagcccagtatggtcact
cagacatcgtcctccactacagctgcccccagcaagaccaccacagccaccctgaacagt
tccagcagcaccagctctctgtgtgtggctgcctcctcctcccctgccaccagctccagt
cctccctaccttaaacctgtcaacatagtcagcagtggtgttgcaggtgtcaagaactca
ttagccaataacctctctgctgccaactctgcctcagctgggaagaaagtcagcaccccc
aagatcaattttgtcggtggaaataaattacagaccacagtgaagatggatgaggccaga
gcagaggccaaagtggagtcctctaagcctgcaacaccctcatcaggttctcaggacccc
aagactgaagtttcagattctctgtccacatcagccctggccggactgcagagtgatgtc
cagcctgtcggtcatgactatgttgaggaagtccgaaacgatgaaggcaaagtcatccgc
ttccactgcaagctgtgtgaatgtagtttcaatgatccaaatgcaaaggaaatgcatcta
aaaggtcgtaggcatcgactgcagtacaagaaaaaggtgaacccagatctgcaggtggag
gtcaagcccagcatccgagccagaaagattcaggaggagaagatgagaaagcagatgcag
aaagaggagtactggagaagaagagaggaggaggagcgctggagaatggagatgcggcgt
tatgaagaagacatgtactggagacgtatggaggaggagcagcaccactgggatgagcga
cgtcgtttaccagacggagggtatccacaagggccccctggccctcctggtctacttgga
gtccggcctggcatgcctggtctgcagcctcagggtcccgtgcccccacgtcggcctgat
tcttcagacgatcgctatgtcatgaccaagcatgcagccatctacccctcagaggatgag
ctccagtccattcagaagattgtgtcaatcacagaacgtgccctcaaactggtctcggac
ataattacagaccaggacaaggccaaggaagaagacaaagagaagaaagaatcctgtaaa
gacagagccctgaagggagtgatgagggtcggagtcctggccaaaggcttgcttcttcgt
ggagacaaaaatgtcaacctagtcctactctgctctgagaagcccaccaagggcctcctg
acccgcattgtggagcacctccccaaacaactaacaatggtcacaccagaaaaatatgag
gtcaagggatctatccaagaagcggccatcattctgacatcctgtaccgagccaaagatg
caagtgacaatcacattgacttcacctgtcatcagagaggaaaatggccgggacggagat
gtaacctcgggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgac
gctctggctgctctgcgccacgctaagtggttccaggctagagctaatggtcttcagtcc
tgtgtgatcatcatccgaatcttgcgagacctctgtcagagagttcctacgtggtcgccc
ttcccgggatgggccatggagctgttggtggagaaggccatcagcagcgcctctgccccc
ctcagccccggtgatgcattaagacgggtctttgaatgtatttcttctgggattttactc
cctggtggaccaggactggtggatccctgtgaaaagaagcctgtggacaccctgacaccc
atgggagagcaacagagagaggacatcacctcaagtgcccaatttgctctgaggctgctg
gccttccgtcagatccataaagttttgggcatggaccctctgccacaaataaaccctcgc
ttcaacatccgcaacagccgcaagcgtcgccgtgacaacagcgatggaacagacagcttt
gagggcgaaggcaaaaaagacaagaaagattatgatagtttctaa

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