Lates calcarifer (barramundi perch): 108878325
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Entry
108878325 CDS
T04895
Symbol
stxbp1b
Name
(RefSeq) syntaxin-binding protein 1b isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108878325 (stxbp1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108878325 (stxbp1b)
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108878325 (stxbp1b)
SNARE
SNARE associated proteins
Syntaxin-binding proteins
108878325 (stxbp1b)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108878325 (stxbp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
YlbD_coat
SGT1
FRB_dom
XH
Motif
Other DBs
NCBI-GeneID:
108878325
NCBI-ProteinID:
XP_018524423
UniProt:
A0AAJ7LIL6
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Position
LG13:complement(22848236..22869951)
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AA seq
603 aa
AA seq
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MAPLGLKAIVGEKIMNNVIKKAREKGKWKVLVVDKLSMRMVSSCCKMTDIMSEGITIVED
ISKRREPLPSMEAIYLITPSDESVEGLIDDFRDPQAPRYRAAHVFFTDTIPDSLFGLLTK
SRASKAMKALTEIHVAFLPYESQVFSLDKVDAFQDFYSPFKTDVKNNMLERCAEQIATLC
ATLKEYPGVRYRGEYKDCAVLAQMLQEKLDGYKADDPTMGEGPDKSRTQLLILDRGFDPV
SPILHELTLQAMAYDLLGINNDVYSFETSGMGETRMKEVLLDEDDDLWLTLRHKHIAEVS
TAVTRSLKEFSASKKMNTGEKTTMKELSQMLKKMPQYQKELSKYSTHLHLAEDCMNRYQG
TVDKLCRVEQDLAMGTDAEGEKIKDPMRLIVPILLDANVSVSDKIRIILLYIFLKNGVTE
ENLCKLLQHANIPPEDSDIISNMAHMGVPIISEGTAKKAKKPDRKERISEQTYQLSRWTP
LVKDLIEDAIEDKLDPKQYPYISQRQASAKASAPSSARYGNWHKNRGPTEMKTGPRIIIF
IIGGMTYSEMRCVYEVTQANGKWEALIGSTHILTPPKYLQELQHPDFLDPNAPPEGTEEP
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacttggattaaaagccattgttggagagaaaataatgaacaatgtcatcaag
aaggcaagagaaaagggaaagtggaaggtgctggtggtggataagttgagtatgaggatg
gtttcttcctgctgtaagatgacagacatcatgtcagagggaatcaccattgtagaagac
attagcaagcggcgtgagcctctacccagcatggaggccatctacctgatcacaccctca
gatgagtctgttgagggtctgattgatgacttcagagacccgcaggctcccaggtaccgt
gcagctcacgtcttcttcactgacacgatcccagactccttgtttggactgttgacaaaa
tcccgcgcctccaaagccatgaaggccttgactgagatccatgtcgcctttctcccctat
gagtcacaggtcttctccctggataaggtggatgcctttcaggacttctacagccccttc
aagaccgatgtgaagaataatatgctggagcgttgtgctgagcagattgccaccctctgt
gccacactcaaagagtatcctggagtccgatacagaggggagtacaaagactgtgcagtt
ctggcccagatgcttcaggagaagctggacggctacaaggctgatgaccccaccatggga
gagggtccagacaagtctcgtactcagctgctcattctggatcgtggctttgatcctgta
tcacctatcttgcatgagctcacgctgcaggccatggcctacgacctgctgggcatcaac
aacgatgtctacagctttgagaccagtgggatgggagagaccagaatgaaggaggttttg
ctggatgaagatgatgacctgtggctgactctgagacacaaacacattgctgaggtgtca
acggctgtgactcgttctctgaaagaattctctgccagcaaaaagatgaacactggagaa
aagaccaccatgaaggaactgtctcagatgctgaagaagatgcctcagtatcagaaagaa
ctcagtaagtattcaacccatctccacctggcagaggactgtatgaaccgttaccagggc
actgtggacaaactctgtcgtgtagaacaggatctggcaatgggcacagatgcagaggga
gaaaagatcaaggatcccatgaggctcattgtacctattctactggatgctaatgtcagt
gtgtctgacaagatccgcatcattctgctctacatcttccttaagaacggggtgactgag
gagaacctgtgtaagctccttcagcatgccaacatcccaccagaggacagtgacatcatt
tccaacatggcccacatgggcgttcccattatctctgagggcaccgccaagaaagccaag
aagccggatcgtaaagaacggatcagtgagcagacctaccagctctccaggtggactcct
cttgtcaaggatcttattgaggatgctattgaggacaaacttgaccccaagcagtacccg
tacatttcccaacgacaagcatctgccaaagccagtgctccatcaagtgctcgctatggt
aactggcacaagaacaggggccccacagagatgaagacggggcccaggatcatcatcttt
attattggagggatgacatatagcgagatgcgctgcgtgtatgaggttacccaggccaat
ggcaagtgggaagccctgattggttccacccacattctcaccccccctaagtacctacag
gaactacagcacccagacttcttggaccccaatgccccaccagagggcacagaggagcca
cctgcagaatga
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