Lates calcarifer (barramundi perch): 108878339
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Entry
108878339 CDS
T04895
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108878339 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108878339 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108878339 (pdlim2)
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
108878339
NCBI-ProteinID:
XP_018524457
UniProt:
A0A4W6G6B8
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Position
LG13:complement(14588170..14622361)
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AA seq
366 aa
AA seq
DB search
MALTVNLIGPSPWGFRIFGGRDFKKAITVSKVNGGSKAEQADLQPGDIILEINGENTTDM
LNVEAQNKIKNSKTHLQLVVQRPEPSSPGQTNGISTPEQLTGRFQEAVIVSRDENQNYRE
YTISSPASLSPGPYSPDPPPSPDGKRERLTPTTNKSVQLRSWSPEDKSHRLSRPLSQEFS
PSDYRNNSVSSRTPTPPGRYSPHSPIDRDVPMSPRRSSSSSDFAMHKFDRDSEVYKMIQE
NKESRTAPRQSNTFKMLQEVLEADEKEAALRFPGKLSPSPPKPGTSVGGVSKYHTCEKCG
TNIVTQAVRITDDHFRHPECYTCTDCGLNLRMRGHFWVGDVMYCEKHAKQRYQGPGSLQA
TVSPRQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacggtgaacctgattggtccttcaccatggggctttagaatatttggagga
agggactttaagaaggccataactgtatcaaaggtcaatgggggaagcaaggcagagcag
gcagacttgcaacctggtgacattatcttggagatcaacggggaaaacacgaccgatatg
ctgaacgtggaggctcagaacaagatcaagaactccaagacccatctgcagctagtggtg
cagaggccggaaccttccagccctggacagaccaacggcatcagcacccctgaacagctc
accggacgctttcaggaggcagtaatagtgagtcgagatgagaaccagaactacagggag
tacaccatctccagccctgcatcactgtcccctggaccttattcaccagatcctcctccc
agccctgatgggaagagggagaggctgacacccaccaccaacaagagtgtccagctgcgc
tcgtggtctccagaggacaagagtcacaggctgtccagaccactgtcacaggagttctcc
ccttcagactacagaaataactctgtgtccagcagaaccccgacccccccaggacgctac
tcaccccacagtcccattgatcgggatgtacccatgtctccccgacgcagcagctcaagc
tctgacttcgccatgcacaagttcgacagggactcagaggtgtacaagatgatccaggag
aataaggagtcccgcacagcaccccgtcagtccaacaccttcaaaatgctccaagaggtc
ctggaggctgatgagaaagaggcagccctgcggttcccagggaaactttcgcccagcccc
cccaaaccaggcacatcagtgggaggagtcagcaaatatcacacctgtgagaagtgtggc
accaacattgtcacacaggccgtgcgcatcacggatgaccacttccgccacccagagtgc
tacacctgcacagactgtggccttaacctcaggatgagaggtcacttttgggtcggagat
gtgatgtactgtgagaagcacgccaaacagaggtaccaaggcccaggttccctccaagcc
accgtgtcccctcgccaatga
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