Lates calcarifer (barramundi perch): 108878351
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Entry
108878351 CDS
T04895
Symbol
fgfr1a
Name
(RefSeq) fibroblast growth factor receptor 1-A isoform X2
KO
K04362
fibroblast growth factor receptor 1 [EC:
2.7.10.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04520
Adherens junction
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108878351 (fgfr1a)
04020 Calcium signaling pathway
108878351 (fgfr1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108878351 (fgfr1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108878351 (fgfr1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108878351 (fgfr1a)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108878351 (fgfr1a)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108878351 (fgfr1a)
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108878351 (fgfr1a)
Protein kinases [BR:
lcf01001
]
Receptor tyrosine kinases (RTK)
FGFR family [OT]
108878351 (fgfr1a)
CD molecules [BR:
lcf04090
]
Proteins
108878351 (fgfr1a)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108878351 (fgfr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
V-set
Ig_5
C2-set_2
Ig_4
Ig_6
ABC1
Herpes_gE_N
V-set_CD47
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
108878351
NCBI-ProteinID:
XP_018524482
UniProt:
A0AAJ7LKC8
LinkDB
All DBs
Position
LG13:complement(17146952..17171175)
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AA seq
830 aa
AA seq
DB search
MPQRSEWSSSRRQANSCSSLSRMLMRQSILLFLALFAQVLKTQCRPAIADEVSVETQAEL
FTLCLGDRLDLACSAKDSHAVNWTKDHVAVVDGEHTRIRNGQLEIEAVELTDSGLYACTT
FGNHSLYFNVTVDTQASSEDDDEDEESSSEEAKLLGSQKLLPMAPQWAHPEKMEKKLHAV
PASKTVKFRCQASGNPTPTLKWYKNGKEFKRDHRIGGFKVRDHVWTIIMESVVPSDKGNY
TCVVENQYGSINHTYQLDVVERSPHRPILQAGLPANRTVAVGSDVEFECKVFSDPQPHIQ
WLKHIEVNGSRVGPDGLPYVRVLKTAGLNTTDKEMEVLQLRNVSFDDAGEYTCLAGNSIG
FSHHSAWLTVFEAVTHYPPASHTYLEVVIYCVGFFFIAVMIAIAVIVKIRTSSKKSDFNS
QLAVHKLAKSIPLRRQVSVDSSSSIHSGVMLVRPSRLSSSGSPMLSGVSEYELPQDPRWE
LSRERLVLGKPLGEGCFGQVVMGEALGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEM
EMMKIIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPDQVPV
ENMSIKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID
YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL
LKEGHRMDKPSTCTHELYMMMRDCWHAVPSQRPTFKQLVEDLDRCLAMTSNQEYLELSVP
LDQYSPNYPDTRSSTCSSGEDSVFSHDAGAEEPCLPKFPPHSNGAAIKKR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaaggtctgaatggagttccagtcgcagacaagccaacagttgtagctccctc
agcaggatgctgatgaggcaaagtatacttctgttcctggctttatttgcccaagtttta
aagacccagtgccgaccagccatcgctgatgaagtctctgtggaaacacaagcagagctg
ttcacgctctgtcttggggatcgtctggatctggcttgctctgccaaggactcccatgct
gtcaactggaccaaagaccatgtggctgtagtggatggagaacacacacgcatccgcaat
ggccagctggagattgaggctgtggagctgaccgactctggcctgtatgcatgcaccacc
ttcggcaaccacagcctctacttcaatgtcacagttgatacccaggcctcatctgaggat
gatgatgaagatgaagagtcttcatcagaggaagccaagctgttgggcagtcaaaagctg
ctgccaatggccccacaatgggctcatccagaaaaaatggagaaaaagcttcatgctgtc
ccagccagtaagactgtgaagtttcgatgtcaggccagcggcaacccaactcccactcta
aaatggtacaagaatggcaaggagttcaagagagaccatcgtattggaggcttcaaggtc
cgtgaccatgtgtggaccatcatcatggaatctgtagttccctcagacaagggtaactat
acctgtgtggtggaaaaccagtatgggagcatcaatcacacctatcagctagatgtagtc
gagcgctctccccacaggccaatcctgcaggctggcctgccagctaatcgcaccgtggca
gtgggcagcgacgtggagtttgagtgcaaggtgttcagcgaccctcagccccacatccag
tggctgaagcatatcgaggtcaacgggagccgcgttggtcctgatggtttaccatatgtc
cgtgtcctcaagaccgctggccttaacaccacggacaaggaaatggaagtcctccaactg
agaaatgtgtcttttgatgacgctggggagtatacctgcttggcgggcaattctatcggg
ttctctcatcactctgcatggttgaccgtttttgaagctgtcacgcactacccaccagcc
agccacacctacctggaggtggtcatctactgtgttggcttctttttcatcgccgtcatg
atcgccatcgcagttattgtcaagattcgcacttcctcaaagaagagtgacttcaacagt
cagctggctgtccacaagctggctaaaagcatcccactgcgcagacaggtatctgtggac
tcaagctcctccatccactctggagtgatgctggttcgcccctcccgcctctcctctagt
ggatctccaatgctgtcaggggtgtctgagtatgaactgccacaagatccccgctgggag
ctttcccgggagagacttgtccttgggaagccgctgggtgaaggctgttttggtcaggtg
gtgatgggagaggcactgggtctcgacaaagagaagccaaaccgtgtgaccaaggttgca
gttaaaatgttgaaatctgatgccacagagaaagacctgtcagacctgatttcagagatg
gagatgatgaagatcattgggaagcacaagaacatcattaatctgctgggagcctgtaca
caggatggtcctctgtatgtgatagtagagtatgcatccaagggaaacttgcgggagtac
ttgagagctcggcgccccccgggcatggagtactgctacaacccagaccaggttcctgtg
gagaacatgtccattaaagacctggtgtcctgtgcttaccaagtggcccgaggcatggag
tatttggcttccaaaaagtgcattcacagagatcttgccgctcgcaatgttttggtaaca
gaggacaacgtgatgaaaatagctgactttggcctggcaagagatatccaccacattgat
tactataagaagaccaccaacggtcgtctaccagtcaagtggatggcccccgaggctctg
ttcgaccggatatacacacaccaaagtgatgtctggtcctttggggtgctgctctgggag
atcttcaccctgggaggctctccgtatcccggcgtcccagtggaagagctgttcaagctg
ctgaaggaaggtcaccgcatggacaagccctcaacgtgcacgcacgagctgtatatgatg
atgagggactgctggcatgctgtgccctctcagagacccacattcaaacagctggttgag
gatctcgatcgctgcctggccatgacatccaaccaggagtatttggagctttcagtgcct
ctggaccaatattcccccaactaccccgacacccgcagctccacctgctcctctggtgag
gactcggtcttctcccacgatgctggagccgaggagccctgtctgccaaagttcccgccc
cactccaacggggcagccattaagaaacgctga
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