Lates calcarifer (barramundi perch): 108878352
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Entry
108878352 CDS
T04895
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108878352
Membrane trafficking [BR:
lcf04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
108878352
SSDB
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Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_1
LRR_9
LRRCT
LRR_14
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
108878352
NCBI-ProteinID:
XP_018524485
UniProt:
A0A4W6FHE2
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Position
LG13:complement(17129759..17136769)
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AA seq
548 aa
AA seq
DB search
MLELGPRWLRLICLCVLCLCLCLPRESNARRAPKIPRCPATCSCTKDSAFCVDTKAIPKS
FPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTAIADDAFAGLSHLQYLFIEN
NDIQSLSKYTFRGLKSLTHLSLSNNNLQQLPRDLFKHLDILTDLDLRGNSFRCDCKIKWL
VDWMEKTNTSVPAIYCASPFEFQGRRIHDLVPRDFSCISADFAVYETFPFHSVSVESYEF
NGDQFVAFAQPDSGFCTVYVWDHVEMVFRRFHNITSRSAVYCKPVVINNTLYMVVAQLFG
GSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDGEWYFVVADSSKAGSTSIYRWNS
NGFYSHQSLHPWHRDTHVEFLDVGGKPHLILSSASQPPVVYQWSRGQRQFAFYSQITELA
DVQMVKHFWVRKVLYLCLTRFIGDSKILRWEGQRFIEIQTLPSRGSMAVYPFTVGLRQYL
ILGSDFSFSRVYLWDDLTQRFQPFQELNMRAPRAFSLVSVDNKDILLAASFKGNTLAYQH
LVVDLSAK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttggagctcggaccgagatggctgaggctgatctgcttgtgtgttctgtgtctgtgt
ctctgcctgcccagggaatcaaacgccaggagagcccccaagataccccgttgtcctgcg
acctgctcctgcaccaaagacagtgccttctgtgtggacaccaaggctatccccaagagc
ttccctcctggaatcatctctctgaccatggtgaacgcagcattcaccacaatcccagag
ggagcgttctcacaccttcacctactgcagttcctgctcttgaactccaacacattcact
gcaatagctgatgatgcctttgctggtctgtctcatctgcagtacctgttcattgagaat
aatgacatccagtctctctcaaagtacacttttagaggactcaaatccctgactcatcta
tctctctcaaacaacaacctgcaacagctacctagagatctcttcaaacatctagacatc
ctcacagatttagacctgcgggggaactccttccgctgtgactgtaaaatcaaatggctg
gtagactggatggagaagaccaacacttctgttcctgccatctactgtgccagccccttt
gaattccagggacgcagaatccatgatctcgtaccacgagacttcagctgcatcagcgca
gattttgctgtttatgaaaccttccctttccactctgtgtcagtggagtcctatgagttc
aatggagatcagtttgtggcttttgctcagcctgactcagggttctgcaccgtgtatgta
tgggatcatgtggagatggtcttcaggaggtttcacaacatcacctctcgctctgctgtg
tactgcaaaccagtggtgataaacaacacactgtacatggttgtggctcaactttttggt
ggatctcatatctacaagtgggaagaggacccgcagcgctttgtaaagatccaagacata
gacaccactcgagtgaggaagcccaactttgtggagaccttccagctggatggagagtgg
tactttgtagtagcagacagctccaaggcaggctccaccagcatttatcgctggaacagc
aatggtttctactcccaccaatcgctccatccctggcatcgggacacccatgtggagttc
ctggatgttgggggaaagcctcacctcatcctctcaagcgcctctcaaccaccagtagtt
taccagtggagccgaggccagaggcagtttgctttctactcccaaatcacagagctggcc
gacgtgcagatggttaagcacttttgggtgaggaaagttctttacctttgcctcacgcgc
ttcattggcgactccaagatcctccgctgggaagggcagcgtttcatagagatccagact
ctcccgtcccggggctcaatggcagtgtatccttttacagtgggcctacgccagtacctt
attcttggaagtgatttctccttctccagagtgtacctgtgggatgacctcactcagcgc
tttcagcccttccaggagctcaacatgagagccccgcgggcgttcagcctggtatctgtc
gacaacaaggacattctgctggctgccagcttcaaaggcaacaccctggcctaccagcac
ctggtggtagatctcagtgccaagtag
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