Lates calcarifer (barramundi perch): 108878376
Help
Entry
108878376 CDS
T04895
Symbol
bmp1a
Name
(RefSeq) bone morphogenetic protein 1a isoform X1
KO
K05502
bone morphogenetic protein 1 [EC:
3.4.24.19
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108878376 (bmp1a)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108878376 (bmp1a)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.19 procollagen C-endopeptidase
108878376 (bmp1a)
Peptidases and inhibitors [BR:
lcf01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
108878376 (bmp1a)
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108878376 (bmp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Astacin
FXa_inhibition
CUB_M02D8_5_3rd
EGF_CA
CDCP1_CUB_6
cEGF
EGF
hEGF
EGF_3
Peptidase_M10
GPR158_179_EC
EGF_MSP1_1
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
108878376
NCBI-ProteinID:
XP_018524527
UniProt:
A0AAJ7LIR7
LinkDB
All DBs
Position
LG13:complement(14328253..14358495)
Genome browser
AA seq
981 aa
AA seq
DB search
MDLTARCLFLLSCLGVILAIDLEAIDPGYYVEPTATSEAIDYKDPCKAAAFLGDIALDEE
DLRSFKVDRIIDLAQRTVHTVNHTDPGSTNQSSQNRQGSHRRKRAATSRPERVWPEGVIP
YVISGNFSGSQRAIFRQAMRHWEKHTCVTFIERTQEESYIVFTYRPCGCCSYVGRRGGGP
QAISIGKNCDKFGIVVHELGHVIGFWHEHTRPDRDEHVSIIRDNIQPGQEYNFLKMEPGE
VDSLGEVYDFDSIMHYARNTFSRGIFLDTILPRYDVNGVRPPIGQRTRLSKGDIAQARKL
YKCSRCGDSLQDSSGNFSSPGFPNGYSAYMHCIWRISVTPGEKIILNFTSMDLYRSHLCW
YDHVEIRDGYWRKAPLKGRFCGDKLPEPIISTDSRLWIEFRSSSNWVGKGFSAVYEAICG
GEVKKDNGQIQSPNYPDDYRPNKVCVWKISVAQGYHVGLTFQSFEIERHDSCAYDYLEVR
DGNSENSPLLGRFCGYDKPDDIKTSSNHLWMKFVSDGSVNKAGFAANFFKEMDECSKPDN
GRCEQRCVNTLGSYKCACDPGYELAADKRSCEAACGGFITKLNGSITSPGWPREYPPNKN
CIWQLVAPTQYRITLLFDVFETEGNDVSTGVIMNRHGVCKYDYVEVRSGLSADSRLHGKF
CGAEKPEAITSQYNNMRIEFKSDNTVSKKGFKAQFFSDKDECSKENGGCQHECVNTFGSY
SCQCRSGFVLHENKHDCKEAGCDHTVNSVSGIITSPNWPDKYPSKKACTWALTTTPGHRI
KIAFNEIDVEAHLECTYDHIEIYDGRDGKAPSLGRFCGTKKPQPITSSGNKLFIRFFSDN
SVQKKGFEASHTAECGGHLKAEVKTKDLFSHAQFGDNNYPGASDCEWVISAEKGYGVELI
FQTFEIEEEADCGYDYMELFDGDDTKSPRLGRYCGSGPPEEIYSAGDSIVIKFRSDDTIN
KKGFHVRYTSTKFQDTLHSRK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggatctcacggcgagatgtttgtttcttctgtcctgtctcggcgtgatattggcgatc
gatttggaagcgattgatccaggctactacgtggagcccactgccacatcagaggcgatc
gactataaagatccctgtaaagctgctgcctttctgggagacattgctctggatgaggag
gacctgcggtctttcaaagtggacagaataatagatttggctcagagaaccgtccacact
gtcaatcacacagatccaggatcaaccaatcagagcagccaaaataggcaaggctcacat
cgcaggaaaagggctgccacctcccgacctgagcgcgtttggcctgaaggtgttatcccc
tatgtcatcagtggtaactttagtggcagccagcgggctatattccgccaagccatgcgg
cactgggagaagcacacctgtgtgacctttattgagaggacacaggaggagagctatatt
gtcttcacctaccgaccatgtgggtgctgttcctatgtgggtcgccgtggagggggaccc
caggccatatccattgggaaaaactgtgacaagtttggcattgtggtgcatgagttgggt
catgtgattggcttctggcacgaacacacacggcctgatcgagacgaacacgtcagtatt
atcagggacaacattcaaccaggacaggagtataacttcttgaagatggagccaggagag
gtggattccttgggagaagtctatgactttgacagtatcatgcactatgccaggaatact
ttctccagaggcatcttcttggacaccatcctgccacgctacgatgtgaacggagtccga
ccacccattggccagagaaccagactgagcaaaggggatatcgcacaggcacgcaaactc
tacaaatgctccagatgtggggacagtctgcaggacagcagcgggaacttctcctcgcct
ggcttccccaatggatactcagcctacatgcactgcatctggagaatatcagtcacgcca
ggggagaagatcattctgaacttcacctccatggatctgtacaggagtcacttgtgttgg
tatgaccatgtagagatccgagatggatactggagaaaggcaccactcaaaggtcgtttc
tgcggcgataagctcccagagccaatcatctccaccgacagccgtctgtggattgagttc
cgcagcagcagtaactgggtgggaaaaggtttctccgccgtttatgaggccatctgtggt
ggggaggtgaagaaggacaacggccagatccagtcccccaactaccccgatgactacagg
cctaacaaagtgtgtgtgtggaagatttctgtagctcagggctaccacgtaggccttacc
ttccagtcttttgagattgagagacatgacagttgtgcctatgattacctggaagtgcgt
gatgggaactctgaaaacagccctcttctgggccgcttctgtggctacgataagccagat
gacatcaaaaccagctccaaccacctgtggatgaaatttgtttcagatggttctgtcaac
aaggctggcttcgctgccaacttcttcaaagagatggatgagtgctccaagccggacaac
ggtcgctgtgagcaacgctgtgtcaacacactaggcagctacaagtgtgcctgtgaccca
ggctatgagctggctgctgacaaacgcagctgtgaggctgcctgtggaggcttcatcacc
aagctgaatgggtcaatcaccagtccgggttggcccagagagtaccctccaaacaagaac
tgcatctggcagctggttgcccccacgcagtaccgcatcactctgctctttgacgtcttt
gagactgagggcaatgacgtgagcactggggttattatgaatcggcacggggtttgtaaa
tatgactatgtggaggtgcgcagcgggctttcggcagattcaaggctccatgggaagttc
tgtggggcagagaaaccagaagctattacctctcagtacaacaacatgcgaattgagttt
aaatctgacaatacggtgtccaaaaagggcttcaaagcacagttcttctcagacaaagac
gagtgctccaaagagaacggcggctgtcagcatgagtgtgtcaacacctttgggagctac
agctgtcagtgcaggagtggctttgtgctgcatgagaacaaacacgactgcaaagaagct
ggctgtgatcacactgtgaatagtgtgagtggtatcatcaccagccccaactggccggat
aaataccccagcaagaaggcatgcacctgggcactcaccaccactccaggccaccgcatt
aaaatcgccttcaatgagatcgatgtggaggcccacttggagtgtacttatgaccacatt
gagatttatgatgggcgtgatggaaaagcgccgagtctgggtcgcttctgtggcaccaag
aagccccagcccatcacatccagtggaaacaagctgttcattcgctttttctctgacaat
tctgttcagaagaaaggcttcgaggcttcccacactgcagaatgtggaggtcatctaaag
gctgaggtcaaaaccaaggacctgttctcccatgcccagtttggggacaataactacccc
ggagcctccgactgtgagtgggtgatctcggcggagaaggggtacggtgtggagctcatc
ttccagacctttgagattgaggaggaggcggactgtggctatgactacatggagctcttt
gatggagatgacaccaagtctccacgtctgggacgttattgtggctcagggcctccagag
gagatctactcagccggtgactccattgtgattaagttccgctctgatgataccatcaac
aaaaaaggatttcacgtccgctacaccagcaccaagttccaggacacactgcactcacgc
aagtga
DBGET
integrated database retrieval system
