Lates calcarifer (barramundi perch): 108878408
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Entry
108878408 CDS
T04895
Symbol
polr2g
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03020
RNA polymerase
lcf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108878408 (polr2g)
09124 Replication and repair
03420 Nucleotide excision repair
108878408 (polr2g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108878408 (polr2g)
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108878408 (polr2g)
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108878408 (polr2g)
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
108878408 (polr2g)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108878408 (polr2g)
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108878408 (polr2g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
108878408
NCBI-ProteinID:
XP_018524593
UniProt:
A0AAJ7LIU6
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All DBs
Position
LG8:13170053..13172783
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AA seq
172 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTVDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcatatttctctggagcatgaaatcttactacacccgcggtattttggtccg
aacctccttaacaccgtgaagcagaagcttttcacagaagtggaggggacctgcactggc
aagtatggctttgtcattgcagtcaccaccattgacaacattggggcaggtgtaatccaa
ccaggcagagggtttgtcctgtacccagtcaagtacaaggccattgttttccgcccattt
aaaggggaagtggtggacgctgtggtcactcaggttaacaaggtcggactgttcacagaa
attggtcccatgtcttgcttcatctctcgccattccatcccctcagaaatggagtttgac
cccaattctaatcctccttgttataagacagttgatgaggacattgtaatccagcaagat
gatgagatccggctaaagattgtgggaacaagagtggacaagaatgacatttttgctatt
ggatctcttatggatgattatctgggtcttgtgagctga
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