Lates calcarifer (barramundi perch): 108878417
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Entry
108878417 CDS
T04895
Symbol
adam28
Name
(RefSeq) disintegrin and metalloproteinase domain-containing protein 28
KO
K08614
disintegrin and metalloproteinase domain-containing protein 28 [EC:3.4.24.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108878417 (adam28)
Peptidases and inhibitors [BR:
lcf01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
108878417 (adam28)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Reprolysin
Disintegrin
ADAM_CR
Reprolysin_5
Pep_M12B_propep
Reprolysin_4
Reprolysin_3
Reprolysin_2
Neurensin
DUF3149
Peptidase_M10
Phage_holin_3_6
Peptidase_M66
Chondroitinas_B
DUF6232
Motif
Other DBs
NCBI-GeneID:
108878417
NCBI-ProteinID:
XP_018524606
UniProt:
A0A4W6G568
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Position
LG13:complement(20294441..20309058)
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AA seq
769 aa
AA seq
DB search
MTRTLLLWILILNASLKPSESHGNDFEDVKDYEVVRPVRLHTVRKRHAEYLRPETIKYAM
TVGGKDIEMQLEKNDELLTKDYTETYYQEDGTRVTTTPNDIDHCYYHGRIVNDSKSSVSI
STCDGLRGYFRTSAQKYLIEPLSGGDEGDHAVMTFNEKNFTPAVCGVTNTSWSDDFEPPT
SRSRSRSAGLSIVQQQKYIELFLVADHREYVKMKQDQTELRKKIFEIVNFVNMAYKPFRT
FIALVGLEVWSNGDLISVTPPAGANLDAFMKWRNTELVKRKKHDNAHLISGIDFEGATVG
LAFIGTLCSGHSVGVVQDHSDQAIAVGATLAHEMGHNLGMDHDDSSGCACSEDSCIMAAA
LSWKIPRTFSSCSSNNYEKYLMTRTPSCMLDKPDYRSMVAPSVCGNGFVEKGEQCDCGTV
EECTNPCCNATTCNLKEGSQCAEGECCENCKISSRSRECRRAQDECDLAEYCDGKSATCP
EDVFAVNGLPCDKGLGYCYNGQCPQRPNQCVKMYGSGAIEARAFCYNQNTRGTYYAFCRR
PANDQYIPCQREDIYCGKLFCHNGNENPNYGRMVRVSDCKAAFFEDYTKDYGQVDTGTKC
GDGKVCSQNECVDLETAYRNTNCSAKCPGHAVCNHRSECQCEPGWMPPYCNSEDGAFTNL
STGAAVAIAMTVILVTLGIIAGVVGYIWKKRQSPMFATTHTQRKQPAVDRSATRFNQGQA
PRHPNPKIAGPKPKGAPPPPPPAGNRPKPPSQNYIAARQALRPVPPPKV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaactctcctattgtggatcctcatcctaaatgcctcgctcaagccctcagaa
agccatgggaatgattttgaggacgtgaaggactatgaggtggttcgacccgtcagactt
cacacagtcagaaaaagacatgcagagtacctcagaccagagactattaagtatgcaatg
accgtgggaggaaaagacatcgaaatgcaactagaaaaaaatgatgaattactcaccaaa
gactacacagagacctactaccaagaagatggaactcgagtcaccacaactccaaatgat
atcgatcactgctactatcatgggaggattgtgaatgacagcaagtcgtctgttagcatt
agcacttgtgatggtctcaggggctacttcagaacatctgcccagaaatacctgattgag
cccctgtctggtggcgatgagggggatcatgcagtaatgacattcaatgagaagaacttc
acacctgcagtgtgtggtgtcaccaacaccagctggagcgatgactttgaacccccaaca
agccgcagccgttccagatcagcgggtttaagtattgtccagcaacagaaatacattgag
ctcttccttgttgctgatcaccgtgagtatgtgaagatgaagcaggatcagacagagctg
agaaagaagatatttgaaatcgtcaactttgtcaacatggcctataaacccttcaggacc
tttattgctctggtgggcctagaggtctggtccaatggtgacttgatctctgtgaccccc
ccagctggggccaacctggatgcattcatgaagtggaggaacactgagctggtcaagagg
aaaaaacatgacaatgcgcatctcatcagtggtattgactttgaaggagcaactgtagga
ctggcttttattgggactctttgctctggtcactctgttggagtggttcaggatcacagt
gaccaagccattgcagtgggggctacactggctcatgagatgggccataacctgggtatg
gaccacgacgactccagtggctgtgcttgttctgaggatagctgcatcatggctgcagcc
ctcagctggaaaattcctcggactttcagcagctgcagcagcaataactatgagaaatac
ctgatgacccgcacccccagctgtatgctggacaaacctgactacaggagtatggtggct
ccctcagtgtgcgggaatgggtttgtagaaaaaggagagcagtgtgactgtggcactgtg
gaggagtgcaccaacccatgttgcaatgctaccacttgcaatctgaaggagggttcacag
tgtgctgagggcgagtgctgtgagaactgcaagatctcgtctcgctccagggagtgccgc
agagcacaggatgagtgtgatctggcagagtactgcgacgggaagagcgccacctgtcct
gaggatgtgtttgctgtgaatggtctcccatgtgacaaaggcctgggatactgctacaac
ggccagtgtccacagaggccgaaccagtgtgtcaagatgtatggatccggtgctatagag
gctcgtgcattctgctacaaccagaacaccagaggaacttactatgccttctgccgccgt
cctgcaaatgaccagtacatcccgtgccagcgagaagacatatactgtgggaagctcttc
tgccataatggtaatgaaaaccctaactatggccgcatggtgagggtcagtgactgcaag
gcagctttctttgaagactacactaaagactacggccaggtggacactgggactaaatgt
ggggatggaaaggtgtgcagccagaatgagtgtgtggatcttgagacagcttacagaaac
acaaactgctctgcaaaatgcccaggccatgctgtgtgcaatcacagaagtgagtgtcag
tgtgagcctggatggatgcctccttactgcaattcagaggatggagcttttactaatctt
tctaccggagcagctgttgccatcgcaatgacagttatactagtgactctcggtatcatt
gctggtgtggtagggtacatctggaaaaaacgacaaagccccatgtttgcaaccacacac
acccagaggaagcagccagcagtggacaggtccgctacccgctttaaccaagggcaagct
cctcgtcaccccaacccaaagattgcagggccaaagcccaaaggagctccacctccacca
cctccagcggggaacagacctaaacccccaagccagaactacatagctgcacgacaggct
ctgaggccagtacctccaccaaaggtctga
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